Nilaparvata lugens (brown planthopper): 120352319
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Entry
120352319 CDS
T07276
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
nlu
Nilaparvata lugens (brown planthopper)
Pathway
nlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120352319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlu03019
]
120352319
Messenger RNA biogenesis [BR:
nlu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120352319
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120352319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
120352319
NCBI-ProteinID:
XP_039288279
LinkDB
All DBs
Position
7:21977069..21990385
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AA seq
184 aa
AA seq
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MESMDNISDSDRTIRLASQRVNLCLNTGNNPPHFYTPGQDIPLEGCMRGHGTYFDKNATT
LKASVSGVLERVNQLILVKPLKSRYNGEVGDVVVGRIMEVQKKRWKVDTNSRLDAILQLS
SVNLPGGELRLRSVEDERMMRKYLSEGDLISAEVQSIFSDGSLALHTRSLKYGKVVVLKF
LCSF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaatctatggataacatttctgattctgacagaacaataaggttggcaagtcaacga
gtgaatctatgcctcaatacaggcaataatccaccacatttttatactcctggacaagat
ataccactagaaggttgcatgagagggcatggaacttactttgacaagaatgcaacaact
ctcaaagcatctgtgtccggtgtcttggaacgtgtgaaccagttaattctagtcaagcct
ctgaaatcacgctacaatggagaagtgggtgatgtggttgttggtagaataatggaggtg
cagaaaaaacgttggaaagtagacactaattcacgattagatgcaatactccaactctcg
tctgtcaatctgccgggaggagaactgagactgcgatccgtggaagatgaaaggatgatg
cggaaatatttgtcagaaggtgatctgatcagtgctgaagttcagagcatattcagcgat
ggaagcttagccttgcacacaagaagtctcaaatatggcaaggtagtggttttaaaattt
ctgtgtagtttttaa
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