Nocardioides marmotae: HPC71_00655
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Entry
HPC71_00655 CDS
T09088
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPC71_00655 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmar03400
]
HPC71_00655 (recD)
Enzymes [BR:
nmar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HPC71_00655 (recD)
DNA repair and recombination proteins [BR:
nmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPC71_00655 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
UvrD-helicase
RecD_N
AAA_22
SH3_13
NTPase_1
AAA_16
AAA_28
NACHT
nSTAND3
AAA_24
AAA_5
SLFN-g3_helicase
Herpes_Helicase
TrwB_AAD_bind
AAA
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QKD99767
LinkDB
All DBs
Position
137226..139055
Genome browser
AA seq
609 aa
AA seq
DB search
MTELFEPVGDHDHRLARGADGLLGALNRAGLLEAGDLHVATRVADLAGETGEGADAEPVL
LALALAVRAVRHGSVAVDLTRFPDLVRDLVPGLALPEPEAWLAAVARSRLVGSGALRLEH
GLLYLDRYHRLEQQVCADLVARAEQPPPPVDEAALAAALDRVGGGRLSDQQRDAADRSVR
QWTTVLTGGPGTGKTTTVARILAVLADQAAARGERLSVALSAPTGKAAARLQEAVETELA
GLPAEDRDRLLRTSGRGRGLDAMTLHRLLGWRPDNATRFRHDRTNRLTYDVVVVDESSMV
ELTLMARLLEAVRPQARLLLVGDPRQLTSVGAGAVLSDLVAGHEGDPASPVVSLTENYRS
TEDIKTLAEALRTGTADEVLAALRTPSPEVEYVETDDPAGVLRPDALASALAVRRAAERG
DAEAAVHALDDHRLLCAHREGPYGVRVWNRTVEQWLAEEIGEDLHHPWYVGRPLLVTTND
HALEVYNGETGAVVLGEDGRVRAWIAGSGGLHDFAPGRLDAVETMHAMTIHKSQGSQARR
VTVLLPEEGSRLLSRELFYTAVTRAQQHVRVVGSEAAVRAAVETSAERATGLRQRLQAAR
AARAAGSGA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctcttcgaaccggtcggcgaccacgaccaccgcctcgcccggggcgccgac
ggcctgctcggcgcactcaaccgggccggcctgctcgaggccggcgacctgcacgtcgcc
acccgggtggccgacctcgcgggggagaccggcgagggggcggacgccgagccggtgctg
ctcgcgctcgcgctggcggtccgcgcggtccggcacggctcggtcgcggtcgacctgacc
cggttccccgacctcgtccgcgacctggtccccgggctcgcgctgcccgagccggaggcg
tggctggcggcggtcgcccgctcccggctcgtcggcagcggtgccctgcggctcgagcac
ggcctgctctacctcgaccgctaccaccggctcgagcagcaggtctgcgccgacctcgtg
gcccgggccgagcagcccccgccgcccgtcgacgaggccgcgctcgccgcggccctggat
cgcgtgggcggcggccggctcagcgaccagcagcgcgacgcggccgaccgcagcgtgcgg
cagtggaccacggtgctgaccggcggccccggcaccggcaagaccacgacggtcgcgcgc
atcctcgccgtcctcgccgaccaggccgccgcccggggcgagcggctctcggtcgccctc
agcgcccccaccggcaaggcggcggcccggctccaggaggcggtggagaccgagctggcc
gggctcccggccgaggaccgcgaccggctgctgcggaccagcggccgtggtcgcgggctc
gacgcgatgaccctgcaccggctgctgggctggcggcccgacaacgcgacccggttccgg
cacgaccggaccaaccggctgacgtacgacgtggtcgtggtcgatgagtcctcgatggtc
gagctgaccctgatggcgcgcctgctcgaggcggtccgcccgcaggcgcggctgctgctg
gtcggcgacccccgccagctcacctcggtcggcgccggcgccgtcctctccgacctggtc
gccgggcacgagggggacccggcctccccggtggtctcgctgaccgagaactaccgctcg
accgaggacatcaagaccctcgccgaggcgttgcgcaccggcacggccgacgaggtcctg
gccgccctgcgcaccccgtcgccggaggtggagtacgtcgagaccgacgaccccgcgggc
gtgctgcgccccgacgcactcgcctcggccctcgccgtccgccgggccgccgagcgcggc
gacgccgaggccgcggtccacgcgctcgacgaccaccggctgctctgcgcgcaccgcgag
gggccctacggcgtacgcgtctggaaccgcaccgtcgagcagtggctggccgaggagatc
ggcgaggacctccaccacccgtggtacgtcggccggccgctgctggtgaccaccaacgac
cacgcgctggaggtctacaacggcgagaccggcgcggtggtgctcggcgaggacggccgg
gtccgcgcctggatcgccggctccggcggcctgcacgacttcgcccccggccggctcgac
gcggtcgagacgatgcacgcgatgaccatccacaagagccagggcagccaggcccggcgg
gtgaccgtgctgctgccggaggaggggtcgcggctgctcagccgcgagctcttctacacc
gcggtcacccgcgcccagcagcacgtgcgcgtggtcggctcggaggcggcggtgcgggcc
gcggtggagaccagcgccgagcgcgccaccggcctgcgccagcggctccaggccgcccgg
gccgcccgcgcggccgggtccggtgcgtga
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