Nocardioides marmotae: HPC71_00710
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Entry
HPC71_00710 CDS
T09088
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nmar
Nocardioides marmotae
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmar03016
]
HPC71_00710 (thpR)
Enzymes [BR:
nmar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HPC71_00710 (thpR)
Transfer RNA biogenesis [BR:
nmar03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HPC71_00710 (thpR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QKD99778
LinkDB
All DBs
Position
151171..151749
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AA seq
192 aa
AA seq
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MRLFAALVPPEEAVEHLDDFLEARREAGPFRWTAAEQLHLTLAFYADVPDHALDELVERL
GTAARRRTPFRARVAGGGAFPDVARARVLWAGLDLDEGAAAELDRLATGCRNAASRSGVG
VDGQRFRPHLTLARLGRPAEVTRWVRLLDAYAGPSWTADRVTLVESHLGEGPRRRPRHEV
VADLPLGGVDLG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctcttcgccgccctggtcccgcccgaggaggcggtcgagcacctcgacgacttc
ctcgaggcgcgccgcgaggccggcccgttccgctggaccgcggccgagcagctgcacctg
accctggccttctacgccgacgtgcccgaccacgcgctcgacgagctggtcgagcggctc
ggcacggccgcccggcggcgtaccccgttccgcgcgcgggtcgccggcggcggcgcgttc
cccgacgtcgcccgcgcccgcgtgctgtgggcggggctcgacctcgacgagggcgcggcc
gccgagctggaccggctcgctaccgggtgccgcaacgccgcgtcccgcagcggggtcggg
gtcgacgggcagcgcttccgcccgcacctgaccctcgcgcggctgggccgcccggcggag
gtcacccggtgggtccggctgctcgacgcctacgccggcccgtcgtggaccgcggaccgc
gtcacgctggtggagtcccacctcggggaggggccgcggcgccgcccccgccacgaggtg
gtcgccgatctcccgctcggcggggtcgacctgggctag
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