Nocardioides marmotae: HPC71_03090
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Entry
HPC71_03090 CDS
T09088
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nmar
Nocardioides marmotae
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmar03400
]
HPC71_03090
Enzymes [BR:
nmar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HPC71_03090
DNA repair and recombination proteins [BR:
nmar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HPC71_03090
Prokaryotic type
HPC71_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKE03318
LinkDB
All DBs
Position
complement(652758..654101)
Genome browser
AA seq
447 aa
AA seq
DB search
MWFRRDLRLRDNPALLEACADGAVLPLFVLDPRLWGPAGPTRRAYLAASLRSLDAALRGL
GAPGLQVGEGDPVRRVPLAARAAGAERVHVAADFGPYGRERDAAVEQALAADGVELVRTG
SPYAVPPGTVTSGSGDHYRVFTPFHRVWAQQDRPAPQDAPAHADWLALDEGTVGLPEVDP
PDGLELPAAGEDATAERWRAFLDQGIDDYDEQRDLPGTDGTSRMSVHLKWGEVHPRQLLG
DLARRRSTGAATYRKELAWREFYADVLWRQPRTAREYYKTQYARLDYDEPGALFEAWQEG
RTGFPVVDAGMRQLRSVGWMHNRVRMITASFLVKDLHVEWQHGARHFLHWLSDGDLASNN
HGWQWVAGSGTDPSPFFRVFNPTGQGRRFDPEGAYVRRWVAELADPERVPDPHEPSGEVR
AAVGYPEPIVDHAAERREALARWERIR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtggttccgccgcgacctgcgcctgcgcgacaaccccgccctgctcgaggcgtgcgcg
gacggcgcggtgctcccgctgttcgtcctcgacccccgcctgtggggccccgccggcccg
acccgccgggcctacctcgccgcgtcgctccgctcgctcgacgccgccctgcgcggcctc
ggagcccccggcctgcaggtcggggagggcgacccggtacgtcgcgtgccgctcgccgcc
cgcgcggccggcgccgagcgggtccacgtcgcggccgacttcggcccctacggccgcgag
cgggacgcggccgtcgagcaggcgctggccgccgacggggtcgagctcgtgcgcaccggc
tcgccctacgccgtgcccccgggcacggtgaccagcggctcgggcgaccactaccgggtc
ttcacccccttccaccgcgtctgggcccagcaggaccggccggcgccgcaggacgccccg
gcgcacgcggactggctggcgctcgacgagggcaccgtcgggctccccgaggtcgacccg
cccgacgggctggagctgcccgcggcgggcgaggacgcgaccgccgagcggtggcgggcg
ttcctcgaccagggcatcgacgactacgacgagcagcgcgacctgccgggcaccgacggg
acctcgcggatgtcggtgcacctgaagtggggcgaggtgcacccgcggcagctgctcggc
gatctcgcgcggaggcggagcaccggcgcggcgacgtaccgcaaggagctggcgtggcgg
gagttctacgccgacgtgctctggcgccagccgcgcaccgcccgggagtactacaagacc
cagtacgcccggctcgactacgacgagcccggcgcgctgttcgaggcctggcaggagggc
cgcaccggcttccccgtcgtcgacgccgggatgcgtcagctgcgctcggtcggctggatg
cacaaccgggtgcggatgatcaccgccagcttcctggtcaaggacctgcacgtggagtgg
cagcacggcgcccgccacttcctgcactggctctccgacggcgacctcgcctccaacaac
cacggctggcagtgggtggccggctccggcaccgacccctcgccgttcttccgggtcttc
aaccccaccggccagggccgcaggttcgacccggagggggcctacgtgcgccgctgggtg
gcggagctcgccgaccccgagcgggtgcccgacccgcacgagccgtcgggcgaggtccgc
gccgcggtcggctaccccgagccgatcgtcgaccacgccgccgagcgccgcgaggcgctg
gcccgctgggagcggatccgctga
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