Nocardioides marmotae: HPC71_03255
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Entry
HPC71_03255 CDS
T09088
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02624
IclR family transcriptional regulator, pca regulon regulatory protein
Organism
nmar
Nocardioides marmotae
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmar03000
]
HPC71_03255
Transcription factors [BR:
nmar03000
]
Prokaryotic type
Helix-turn-helix
IclR family
HPC71_03255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR_2
HTH_24
HTH_11
HTH_AsnC-type
HTH_36
HTH_29
HTH_Crp_2
HTH_PafC
HTH_5
Rrf2
HTH_9
HTH_20
HTH_26
Motif
Other DBs
NCBI-ProteinID:
QKE00203
LinkDB
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Position
684660..685466
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AA seq
268 aa
AA seq
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MTQAPAAVPIEEGDRDFVQSVAKGLLVLRAFSADRPSLTVADLARETGLSRAAVRRIVLT
LQALGYLGAQGRRLALRPRVLDLGYALMSSAGLSGLVQSHLDVLEAEVREHCSAGIFVDG
EVVYIARAQSRRVLSVVTDVGARLPAASTAIGRVLLSGLDDAEIREHVARRPPTAHTHLS
ITDPERVLEEVRTARLNGFALASEELELGYRAVAVPLHGADGSILAAVNVRMHVGRVSLE
EALRDVVPRLRLAAGRVERDLALHPLPF
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaggcgccggcagccgttccgatcgaggagggcgaccgcgacttcgtgcagtcg
gtggccaaggggctgctggtgctccgcgcgttctccgccgaccgcccgagcctgacggtg
gccgacctggcccgggagaccgggctcagccgggccgcggtgcggcgcatcgtgctcacc
ctgcaggccctcggctacctcggtgcccagggccgccggctcgccctgcgcccccgggtg
ctggacctggggtacgccctcatgtcgtcggccggactgtcggggctggtgcagtcgcac
ctcgacgttctcgaggccgaggtccgtgagcactgctcggccgggatcttcgtcgacggt
gaggtcgtctacatcgcacgggcgcagtcacgtcgcgtgctctccgtcgtcaccgacgtg
ggcgcgaggttgccggcggcgtcgacggcgatcgggcgggtgctgctgagcgggctggac
gacgcggagatccgcgagcacgtcgcccgccgaccgcccacggcccacacccacctgtcc
atcaccgaccccgagcgggtgctggaggaggtgcggacggcccggctgaacggcttcgcg
ctcgccagcgaggagctcgagctcggctatcgagcggtcgccgtgccgctgcacggagcg
gacggctcgatcctcgccgcggtcaacgtgcgcatgcacgtggggcgggtctccctcgag
gaggccctgcgcgacgtcgtgcctcgactgcgcctcgcggccggacgggtggagcgcgac
ctggcgctccatcccctgccgttctga
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