Nocardioides marmotae: HPC71_03545
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Entry
HPC71_03545 CDS
T09088
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
nmar
Nocardioides marmotae
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmar03016
]
HPC71_03545 (miaB)
Enzymes [BR:
nmar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HPC71_03545 (miaB)
Transfer RNA biogenesis [BR:
nmar03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HPC71_03545 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
BAR
Motif
Other DBs
NCBI-ProteinID:
QKE00253
LinkDB
All DBs
Position
746585..748063
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AA seq
492 aa
AA seq
DB search
MSTPRTYEVRTYGCQMNVHDSERLTGLLEGAGYAAAPTGEQADVVVFNTCAVRENADNKL
YGNLGHLAPVKAAKPGMQIAVGGCLAQKDRTTITERAPWVDVVFGTHNIGSLPVLLERAR
VQQEAQVEILESLDVFPSTLPTKRESAYAAWVSVSVGCNNTCTFCIVPALRGKEKDRRPG
DILAEVRALVAEGVTEVTLLGQNVNAYGVEFGDRQAFSKLLRACGEIEGLERVRFTSPHP
AEFTDDVIEAMAETPNVMPSLHMPLQSGSDRVLRAMRRSYRSSKFLGIIDRVRAAIPEAA
ITTDIIVGFPGETEEDFLETLRVVRESRFASAFTFQYSKRPGTPAAVLDDQVPPDVVKDR
YGRLADLVNEIAWEENKAIVGRTVELMVAEGEGRKDAETLRLSGRAPDNRLVHFAAPDPR
LGTPRPGDMVTAEVTYAAPHHLVADRVLAVRRTRSGDAWEARTAAPAAPSGVSLGMPSLG
VPAPLPAAPACG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgccccgcacctacgaggtccgcacctacgggtgccagatgaacgtccacgac
tccgagcggctcaccggcctgctcgagggtgccgggtacgccgccgcgccgacgggcgag
caggccgacgtcgtcgtcttcaacacctgcgcggtccgggagaacgccgacaacaagctc
tacggcaacctcggccacctcgcgccggtcaaggccgccaagcccggcatgcagatcgcc
gtcggcggctgcctggcgcagaaggaccgcaccacgatcaccgagcgcgcgccgtgggtc
gacgtcgtcttcggcacccacaacatcggctcgctgccggtgctgctggagcgggcgcgg
gtccagcaggaggcccaggtcgagatcctggagagcctcgacgtcttcccgagcacgctg
cccaccaagcgcgagtcggcgtacgccgcgtgggtctcggtctcggtcgggtgcaacaac
acctgcaccttctgcatcgtcccggcgctgcgcggcaaggagaaggaccgccgccccggc
gacatcctcgccgaggtccgcgcgctcgtcgccgagggcgtcaccgaggtgaccctgctg
ggccagaacgtcaacgcctacggcgtggagttcggcgaccggcaggccttctccaagctg
ctgcgcgcctgcggggagatcgagggcctcgagcgggtccggttcaccagcccgcacccc
gcggagttcaccgacgacgtcatcgaggcgatggccgagaccccgaacgtgatgccgagc
ctgcacatgccgctgcagtccggctcggaccgggtgctgcgcgcgatgcgccgctcctac
cggtcctcgaagttcctggggatcatcgaccgggtccgtgccgcgatcccggaggccgcg
atcaccaccgacatcatcgtcggcttccccggtgagaccgaggaggacttcctcgagacg
ctgcgggtggtccgcgagtcgcggttcgccagcgccttcaccttccagtactccaagcgc
cccggcaccccggccgctgtcctcgacgaccaggtcccgcccgacgtggtcaaggaccgg
tacggccggctggccgacctggtcaacgagatcgcctgggaggagaacaaggcgatcgtc
ggtcgcaccgtcgagctgatggtcgccgagggcgagggccgcaaggacgccgagacgctg
cgcctctccggccgcgcgcccgacaaccggctggtgcacttcgccgccccggacccccgg
ctgggcacgccgcgacccggggacatggtcaccgccgaggtcacctacgccgcgccccac
cacctggtcgccgaccgcgtgctggccgtgcggcgtacccgctccggcgacgcctgggag
gctcgcaccgccgccccggccgcgccctccggggtctcgctgggcatgccgtcgctcggc
gtgcctgcgccgctgccggcggcgcccgcctgcggctga
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