Nocardioides marmotae: HPC71_03865
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Entry
HPC71_03865 CDS
T09088
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
nmar
Nocardioides marmotae
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nmar03012
]
HPC71_03865 (selB)
Translation factors [BR:
nmar03012
]
Eukaryotic type
Elongation factors
HPC71_03865 (selB)
Prokaryotic type
HPC71_03865 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
Beta-barrel_SelB
SRPRB
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
QKE00314
LinkDB
All DBs
Position
complement(821927..823690)
Genome browser
AA seq
587 aa
AA seq
DB search
MHVVATAGHVDHGKSTLVHALTGMEPDRLAEERARGLSIQLGYAWAEIGGDQVAFVDVPG
HERFVSTMLAGIGPVPAALLVVAADDPWMPQAAEHLAALDALGVAHGVVAVTRADLADPA
ASVARARAEVDRTSLAGAPVVPVSARTGQGLDELRHHLAALVAGLPRPDPGGDVRLWVDR
RFSITGAGTVVTGTLPAGTVRRGDTLELWAGGPPTTVRVRGVQALGAGVDAATGVARVAL
NLTGDGLDRIDRDSVLVTPGAFHPATSVDVRVAGEGRMPERPVLHVGAASFAVRARPLAG
DEGDLVRIALPRAVPFRVGDRALLRDPGSRRVWGVRVLDPEPPGLGRRGAAAARARVLAD
VRPEPDLAGELDRRGLVAAALLHRLGVPTGPLPDGALEADGTLVSAARAAALARQVVELV
RRHDADQPLDRGVPVTAVADRLGVPAAVVAAVAPRVAGGRVVLGEATPALPPDLERALEA
LAADLADQPFAAPPADRLADLGLDARRTAAAAKAGRLLRLAPAVVLLPGADARAVELLRS
LPQPFTTSEARQALGTSRRVVLPLLEHLDRTGRTRRLPDDRRQVVER
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtcgtcgccacggccggtcacgtcgaccacggcaagtccacgctggtccacgcc
ctcaccgggatggagcccgaccggctcgccgaggagcgggcgcgcgggctctcgatccag
ctcggctacgcctgggccgagatcggcggcgaccaggtcgccttcgtcgacgtgcccggc
cacgagcggttcgtcagcacgatgctcgccggcatcgggccggtcccggccgcgctgctg
gtggtcgccgccgacgacccgtggatgccgcaggccgccgagcacctcgcggcgctggac
gcgctcggggtggcccacggcgtggtcgccgtcacccgcgcggacctggccgaccccgcg
gcctcggtcgcccgggcccgcgccgaggtcgaccggacctcgctggccggcgcgcccgtg
gtgccggtcagtgcgcggaccggtcagggcctcgacgagctgcgccaccacctggcggcg
ctggtggccggcctgccgcggcccgacccgggcggcgacgtacggctgtgggtggatcgg
cgcttcagcatcaccggcgcggggaccgtggtgacggggacgctgccggcggggacggta
cgccgcggcgacaccctcgagctgtgggccgggggcccgccgacgacggtccgggtgcgc
ggggtgcaggcgctcggggccggcgtggacgccgcgaccggcgtcgcccgggtggcgctc
aacctcaccggcgacggcctggaccggatcgaccgcgacagcgtgctggtgaccccgggg
gcattccacccggcgacctccgtggacgtgcgggtggccggcgaggggcggatgccggag
cgaccggtgctgcacgtcggcgccgcgtcgttcgcggtccgggcgcggccgctcgccggc
gacgagggcgacctcgtgcggatcgccctgccgcgcgcggtgccctttcgggtcggcgac
cgggccctgctgcgcgacccgggatcacgccgggtctggggcgtgcgcgtgctcgacccc
gagccacccgggctgggccgccgcggggcggccgccgcccgcgcccgcgtgctcgccgac
gtgcggccggagcccgacctggccggcgagctcgaccgccgcggcctggtcgccgcggcg
ctgctgcaccgcctcggcgtaccgaccgggccgctgcccgacggcgcactggaggccgac
ggcacgctggtctcggcggcccgggccgccgccctggcccgccaggtcgtcgagctggta
cgacgccacgacgccgaccagcccctcgaccgcggcgtgccggtgaccgcggtggccgac
cggctcggcgtaccggccgccgtcgtggcggccgtcgcgccgcgggtcgccggcgggcgg
gtcgtcctcggcgaggccacccccgcgctccccccggacctcgagcgggcgctcgaggca
ctggccgccgacctggccgaccagcccttcgccgcgccgcccgccgaccggctcgccgac
ctcggtctcgacgcccggcgcaccgccgccgccgcgaaggccggccggctgctccggctc
gccccggccgtggtgctgctgcccggggccgacgcccgcgcggtcgagctgctccgctcg
ctgccgcagccgttcaccacgagcgaggcccgccaggcgctgggcacctcccggcgggtg
gtcctgccgctcctcgagcacctcgaccggaccggccgcactcggcggctgcccgacgac
cggcgccaggtcgtcgagcgctga
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