Nocardioides marmotae: HPC71_07035
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Entry
HPC71_07035 CDS
T09088
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
nmar
Nocardioides marmotae
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nmar03036
]
HPC71_07035 (smc)
Chromosome and associated proteins [BR:
nmar03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
HPC71_07035 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
QKE00852
LinkDB
All DBs
Position
1462152..1465712
Genome browser
AA seq
1186 aa
AA seq
DB search
MYLKSLTLKGFKSFASSTTLQLEPGITCIVGPNGSGKSNVVDALAWVMGEASAKSLRGGK
MDDVIFAGTSGRPPLGRAEVVLTIDNSDGALPIEYAEVTISRTMFRSGGSEYAINGSTCR
LLDVQELLSDSGIGREMHVIVGQGQLDQILHATPEDRRGFIEEAAGVLKHRKRKEKALRK
LDATEGNLHRLGDLIGEIRRQLKPLGRQAEVARRAQTVQADVRDARARLLADDLVTARTA
LEQELADESVILQRREQVEAAVAAARETEASLEAALREDLPALAAAQETWFALSGLRERL
RGTQSLAAERKRNAAGTAETEHRGGRDPEELEAEAERMRETEQRTAAEVDRHRTALEEAV
AARRAAEDAAAEEDRRIAAVQRAAADRREGLARLHGQVNALRSRATAADEEVGRLGAARE
EALARADRAQRDFTALETRVAGLDAGEEGLDAEHEAATALLDDVEERLAKVRDAAQQADR
DRSALAARKDALELGLDRKDGAAALLAAADTLPGLRGAIATLVTVRSGYETAVAAALGQA
ADAVAVADADAAVEAITHLKSEDLGRAGLVLGSPGDLAPAERPALPGHATYAVDVVECPD
ELRPALARLLDRVAVVDDLDAARALVDQLPEVTAVTRDGDVLATYAAAGGSTSRPSLIEV
QAAVDEAAARLAEVTAAGERLSFDISRLEAERLEAQKRADVAMAKLHESDATLAAVAEEL
GQYGSQARAARGEAERLTQAIARAEEAREQAVAGLADLEARLATAEDAPEEEPDTGERER
LVAAARDARQGEMDARLALRTSEERARALHGRADGLLRAARAEREARAKAAQRRERLLRE
GRAAEAVGTAVAHVLTRLEVSVTRAAEARAAVEQARAGREQQLREVRTRLRDLGREHDEL
VSSAHRDELARAQQRMRIEQLEQRSIEELGLAPDVLVTDYGPDRPVPVAPAPDAAEDDPA
PEPVPYVRTEQEKRLRAAERALATLGRVNPLALEEFSAMEERHRFLTEQLEDLRKTRKDL
LDIVREVDARVEQVFAEAYADVERAFDATFARLFPGGEGRLVLTDPGDMLTTGIEVEARP
AGKKVKRLSLLSGGERSLVAVCFLVSLFKARPSPFYILDEVEAALDDTNLGRLLEIYEEL
RESSQLLVITHQKRTMEVGDALYGVTMRGDGVSAVISQRLREPEPA
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
ttgtacctgaagagcctgactctcaaggggttcaagtccttcgcgtcctcgacgacgctc
cagctcgagccgggcatcacctgcatcgtcggccccaacggctcggggaagtccaacgtc
gtcgacgccctggcctgggtgatgggcgaggccagcgccaagtccctgcgcggcgggaag
atggacgacgtcatcttcgccggcacctccggccgcccgccgctgggccgcgcggaggtc
gtgctcaccatcgacaactccgacggcgcgctgccgatcgagtacgccgaggtcacgatc
agccgcacgatgttccgctccgggggctcggagtacgccatcaacggcagcacctgccgc
ctcctcgacgtccaggagctgctctccgactccggcatcggccgcgagatgcacgtcatc
gtcgggcagggccagctcgaccagatcctgcacgccacccccgaggaccggcgcggcttc
atcgaggaggcggccggcgtcctcaagcaccgcaagcgcaaggagaaggcgctgcggaag
ctcgacgcgaccgagggcaacctccaccggctgggcgacctgatcggggagatccggcgc
cagctcaagccgctgggccgccaggccgaggtcgcccgccgggcccagaccgtccaggcc
gacgtccgcgacgcccgcgcccggttgctcgccgacgacctggtcaccgcccgcaccgcc
ctggagcaggagctcgccgacgagtcggtgatcctccaacggcgcgagcaggtcgaggcg
gccgtcgcggccgcccgggagaccgaggcctcgctcgaggcggcgctgcgcgaggacctg
ccggcgctcgcggccgcgcaggagacctggttcgcgctgtccggcctgcgcgagcggctg
cgcgggacccagtccttggccgcggagcgcaagcgaaacgccgccggcaccgccgagacc
gagcaccgcggcggccgcgaccccgaggagctcgaggccgaggccgagcggatgcgggag
accgagcagcgcaccgccgccgaggtcgaccggcaccgcaccgcgctggaggaggccgtc
gccgcccgccgggccgccgaggacgccgcggccgaggaggaccgccggatcgccgcggtc
cagcgggccgccgccgaccggcgcgaggggctcgcccgcctccacggccaggtcaacgcc
ctgcgctcccgcgccaccgccgccgacgaggaggtcggccggctcggcgccgcccgcgag
gaggcgctcgcccgcgccgaccgggcccagcgcgacttcaccgccctggagacccgggtc
gccggcctcgacgcgggggaggagggcctcgacgccgagcacgaggcggccaccgccctg
ctcgacgacgtcgaggagcggctcgccaaggtccgcgacgccgcccagcaggccgaccgc
gaccgctcggccctcgccgcccgcaaggacgccctcgagctcggcctggaccgcaaggac
ggcgcggccgcgctgctggccgccgccgacacgctccccggtctgcgcggggcgatcgcg
acgctggtcaccgtgcgcagcggctacgagaccgcggtcgccgcggcgctcggccaggcg
gccgacgcggtcgcggtcgccgacgcggacgccgccgtcgaggcgatcacccacctcaag
agtgaggacctcggccgcgccggcctggtgctcggcagcccgggggacctcgcgcccgcg
gagcggcccgccctgccgggccacgcgacgtacgccgtggacgtggtggagtgccccgac
gagctgcgcccggcgctggcccgcctgctcgaccgcgtggcggtggtcgacgacctcgac
gccgcccgcgcgctggtcgaccagctgcccgaggtgaccgccgtgacccgcgatggcgac
gtgctcgccacctacgcggccgccggcggctccacgagccggccgagcctgatcgaggtg
caggccgcggtcgacgaggcggccgcccggctcgcggaggtcaccgcggcgggggagcgg
ctctccttcgacatctcccggctcgaggccgagcggctggaggcgcagaagcgcgccgac
gtcgcgatggccaagctgcacgagtccgacgcgacgctggccgccgtcgccgaggagctg
gggcagtacggctcgcaggcccgcgccgcccgcggcgaggccgagcggctcacccaggcc
atcgcgcgcgccgaggaggcgcgcgagcaggcggtcgccgggctggccgacctcgaggct
cggctggcgacggccgaggacgcgccggaggaggagcccgacaccggcgagcgcgagcgg
ctggtcgccgccgcccgcgacgcccggcagggcgagatggacgcccggctcgcgctgcgc
acctccgaggagcgggcccgcgccctgcacgggcgcgcggacgggctgctgcgcgccgcg
cgcgccgagcgcgaggcccgggcgaaggccgcccagcgccgcgagcggctgctgcgtgag
ggccgggccgccgaggcggtcggcacggccgtggcccacgtgctcacccggctggaggtc
tcggtgacccgggcggccgaggcccgcgcggccgtcgagcaggcccgggccggtcgtgag
cagcagctgcgcgaggtccgcacccgcctgcgcgacctgggccgcgagcacgacgagctg
gtcagctccgcccaccgcgacgagctcgcccgcgcccagcagcggatgcggatcgagcag
ctcgagcagcgctcgatcgaggagctgggtctcgcccccgacgtcctggtcaccgactac
ggccccgaccgcccggtgccggtggcgcccgcgccggacgcggccgaggacgaccccgcg
ccggagccggtgccctacgtccgcaccgagcaggagaagcggctccgcgccgccgagcgg
gcgctggccacgctgggccgggtcaacccgctggcgctggaggagttctcggcgatggag
gagcggcaccgcttcctcaccgagcagctcgaggacctgcgcaagacccgcaaggacctc
ctcgacatcgtgcgcgaggtcgacgcccgcgtcgagcaggtcttcgccgaggcgtacgcc
gacgtcgagcgcgccttcgacgcgacgttcgcccggctcttccccggcggggagggccgg
ctcgtgctgaccgaccccggggacatgctgacgacgggcatcgaggtggaggcccgcccg
gcgggcaagaaggtcaagcggctctcgctgctctccggtggcgagcggtcgctggtcgcg
gtgtgcttcctggtctcgctgttcaaggctcggccctcgccgttctacatcctcgacgag
gtcgaggcggcgctcgacgacaccaacctcgggcggctgctcgagatctacgaggagctg
cgggagagctctcagctgctcgtcatcacccaccagaagcggacgatggaggtcggggac
gcgttgtacggcgtgacgatgcgaggagacggcgtctcggccgtcatcagccagcggctg
cgcgagccggagccggcatga
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