Nocardioides marmotae: HPC71_07085
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Entry
HPC71_07085 CDS
T09088
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar02024
Quorum sensing
nmar03060
Protein export
nmar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HPC71_07085 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPC71_07085 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPC71_07085 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nmar02044
]
HPC71_07085 (ffh)
Enzymes [BR:
nmar01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HPC71_07085 (ffh)
Secretion system [BR:
nmar02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HPC71_07085 (ffh)
Eukaryotic Sec-SRP protein
HPC71_07085 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
cobW
ArsA_ATPase
APS_kinase
Zeta_toxin
ParA
AAA_33
AAA_31
CLP1_P
AAA_24
NPHP3_N
Thymidylate_kin
NTPase_1
NACHT
AAA_17
AAA_16
AAA_18
AAA_30
MobB
AAA
TsaE
Mg_chelatase
PIN-TPR-GreABC
ResIII
SLFN-g3_helicase
AAA_25
6PF2K
Motif
Other DBs
NCBI-ProteinID:
QKE00861
LinkDB
All DBs
Position
1474898..1476469
Genome browser
AA seq
523 aa
AA seq
DB search
MFATLSDRLADTFKNLRGKGRLSEADIDATAREIRIALLEADVALPVVKEFVAAVKDRAR
GEEVSQALNPAQQIVKIVNEELVAILGGETRRLRYAKTGPTVIMLAGLQGAGKTTLAAKL
ALWLKEQGKTPMLVACDLQRPNAVKQLQVNGERVGVPVFAPEPGNGVGDPVSVARASIEE
AKRRLHDVVIVDTAGRLGVDAELMQQASDIRDAVQPDEVLFVVDAMIGQDAVSTAQAFLD
GVGYDGVVLTKLDGDARGGAALSIASITGKPVMFASNGEKMTDFDLFHPDRMASRILDMG
DVMTLIEQAEKAFDSEQAMKAAAKLSGQGGEFTLDDFLEQMQQVRKLGSMSKIMGMLPGM
GQFREQLENFDEREIDRIQAIIQSMTPAERANPKIIDGSRRARIAKGSGRQVSDVNQLVD
RFFEARKMMMQMARGGGIPGMPGMPGLGGPKKGKAKPQPKKGKGAKRSGNPAKAAQQAAA
EKEKAAAAGAANPFGTPAGAEDVDYEQAAAALNLPKDFSKFLK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgccaccctctccgaccggctcgccgacaccttcaagaacctccggggcaagggt
cggctctccgaggccgacatcgacgccaccgcccgcgagatccgcatcgccctgctcgag
gccgacgtcgcgctcccggtcgtcaaggagttcgtggcggcggtcaaggaccgcgcccgc
ggcgaggaggtcagccaggcgctgaaccccgcccagcagatcgtcaagatcgtcaacgag
gagctcgtggcgatcctgggcggcgagacccgccggctgcgctacgccaagaccggcccg
accgtgatcatgctcgccggcctccagggcgccggcaagacgacgctggcggccaagctc
gcgctgtggctcaaggagcagggcaagaccccgatgctggtcgcctgcgacctgcagcgc
ccgaacgcggtcaagcagctgcaggtcaacggcgagcgggtcggcgtaccggtcttcgcc
cccgagccgggcaacggcgtcggcgaccccgtctccgtcgcgcgggcctcgatcgaggag
gccaagcgccgcctgcacgacgtggtcatcgtcgacaccgccggtcgcctcggcgtggac
gccgagctgatgcagcaggcctccgacatccgcgacgccgttcagcccgacgaggtcctc
ttcgtcgtcgacgcgatgatcggccaggacgccgtctccaccgcgcaggccttcctcgac
ggcgtcgggtacgacggcgtcgtcctcaccaagctcgacggcgacgcccgcggtggcgcg
gcgctctcgatcgcctcgatcaccggcaagccggtcatgttcgcctccaacggcgagaag
atgaccgacttcgacctcttccaccccgaccgcatggcctcgcgcatcctcgacatgggc
gacgtcatgaccctgatcgagcaggccgagaaggccttcgactccgagcaggcgatgaag
gcggccgccaagctcagcggtcagggcggggagttcaccctcgatgacttcctcgagcag
atgcagcaggtccgcaagctcggctcgatgtcgaagatcatggggatgctgcccgggatg
ggccagttccgcgagcagctggagaacttcgacgagcgcgagatcgaccggatccaggcg
atcatccagtcgatgacgccggccgagcgggccaaccccaagatcatcgacggctcgcgc
cgggcccggatcgcgaagggctcgggccgccaggtctccgacgtcaaccagctcgtcgac
cgcttcttcgaggcgcggaagatgatgatgcagatggcccgcggcggcggcatcccgggc
atgcccggcatgccgggcctgggcggcccgaagaagggcaaggccaagccgcagccgaag
aagggcaagggcgccaagcggtcgggcaacccggccaaggccgcccagcaggccgcggcg
gagaaggagaaggccgccgccgcaggcgccgccaaccccttcggcacgcccgccggcgcc
gaggacgtcgactacgagcaggccgcggccgcactgaacctgccgaaggacttctcgaag
ttcctcaagtga
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