Nocardioides marmotae: HPC71_07390
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Entry
HPC71_07390 CDS
T09088
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nmar
Nocardioides marmotae
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmar03016
]
HPC71_07390 (truB)
Enzymes [BR:
nmar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HPC71_07390 (truB)
Transfer RNA biogenesis [BR:
nmar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPC71_07390 (truB)
Prokaryotic type
HPC71_07390 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QKE03418
LinkDB
All DBs
Position
1537635..1538510
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AA seq
291 aa
AA seq
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MRPGLVVVDKPGGMTSHDVVARVRRLVGTRKVGHAGTLDPMATGVLVLGVDRATRLLGHL
MLTDKGYDATVRLGVATTTDDAEGEVVSTASAAALDEETVRATLAEFVGELQQVPTAVSA
IKVDGKRAYQRVRDGEQVELQPRAVTVHELVVHDVRREGDVVDVEVSLRCSSGTYVRAIA
RDVGARLGVGGHLTALRRTAVGPYGLDVARTLEELADDVAAGRGGVLPIADAARAAFPSR
DLDDAAAADVRVGRSLDLALDATTAVFAPSGEFLALYEPRGPVARPVAVFV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcccgggtctcgtcgtggtcgacaagcccggcgggatgacctcccacgacgtggtc
gcccgggtgcggcggctcgtcggcacccgcaaggtcggccacgccggcacgctcgacccg
atggccaccggcgtgctggtgctcggtgtcgaccgggccacccggctgctcggccacctg
atgctcaccgacaaggggtacgacgccaccgtccgcctcggcgtggccaccaccaccgac
gacgccgagggcgaggtcgtctcgacggcctcggccgcggcgctcgacgaggagaccgtc
cgcgcgacgctcgcggagttcgtcggggagctccagcaggtgccgaccgcggtctcggcg
atcaaggtcgacggcaagcgcgcctaccagcgggtccgcgacggcgagcaggtcgagctc
cagccgcgggcggtgaccgtccacgagctggtcgtccacgacgtacgccgcgagggcgac
gtcgtcgacgtcgaggtgagcctgcgctgctcgagcggcacctacgtccgggcgatcgcc
cgcgacgtcggcgcccgcctgggcgtgggcggccacctgaccgccctgcggcgcacggcg
gtcggcccctacgggctcgacgtcgcccgcaccctggaggagctggccgacgacgtggcc
gccggccgcgggggagtgctgccgatcgccgacgccgcgcgcgcggccttcccctcccgc
gacctcgacgacgcggcggccgccgacgtccgggtcggccgcagcctcgacctcgccctc
gacgccaccaccgcggtcttcgcgccgtcgggggagttcctcgcgctctacgagccgcgg
ggccccgtcgcccgcccggtcgccgtcttcgtctga
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