Nocardioides marmotae: HPC71_08315
Help
Entry
HPC71_08315 CDS
T09088
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar03030
DNA replication
nmar03410
Base excision repair
nmar03420
Nucleotide excision repair
nmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPC71_08315 (polA)
03410 Base excision repair
HPC71_08315 (polA)
03420 Nucleotide excision repair
HPC71_08315 (polA)
03440 Homologous recombination
HPC71_08315 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmar03032
]
HPC71_08315 (polA)
03400 DNA repair and recombination proteins [BR:
nmar03400
]
HPC71_08315 (polA)
Enzymes [BR:
nmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPC71_08315 (polA)
DNA replication proteins [BR:
nmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HPC71_08315 (polA)
DNA repair and recombination proteins [BR:
nmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HPC71_08315 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPC71_08315 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QKE01073
LinkDB
All DBs
Position
1715583..1718288
Genome browser
AA seq
901 aa
AA seq
DB search
MPDAPTSSPTSAAPPRLLLLDGHSLAYRAFFALPVENFSTTTGQHTNAVYGFTSMLINVL
RDEQPTHVAVAFDVSRQTFRLEEYAEYKAKRAKSPGEFSSQLPLIEEVLDALRIPFLKKD
GYEADDIIATLTTQALADGMEVLILTGDRDSLQLVTDRSTVLYPMRGVSDLARMTPEAVE
AKYGVPPHRYPEIAAIVGETSDNLPGVPGVGVGFAAKWINTYDGLDNVITHADKITGKKG
EALRAHLGDVIRNRRLNALVRDLDLELAPADLAIRPWDRQEVHTLFDGLEFRVLRDRLFE
TLSSEEEIDDSGFDVAMSVLGAGELAGWLAEHASGGDRVGVHVAGRWGAGTGDVDALALA
TVEGAAAYVTAETMDPADEEALRAWLADPARLKVLHDAKGPILALDAWGMPLAGLARDTA
LSAYLARPDQRSYDLADLTVRYLKRELRTGPADDGQLSLDGITDEAAGQVEMLHARAVLD
LAAALDEELADRGGTRLLEDIELPLVDLLATMERTGIAVDTEHLEDLERHFAGEVKLAAE
DAYAVIGKEINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALQALYVKTEHPFLLHL
LRHRDVARLRQTIEGLLKTVAPDGRIHTTFNQTIAATGRLSSTDPNLQNIPVRTEEGRRI
REAFVVGPGYESLMTADYSQIEMRIMAHLSEDALLIDAFRSGRDFHSVTAARVFDVPAEE
VGPEQRAKIKAMNYGLAYGLSAYGLSQQLTIDPAEARVLMDEYFETFGGIRDYLGGVVDV
ARRSGYTETIYGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKIAMLNVDKAIR
EAGLRSRMLLQVHDELVLEVAEGEREALETLVRREMAGAADLAVPLDVSVGTGRSWHDAA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgatgctcccacctcgtccccgacgtcggccgcgcctccgcgcctgctcctcctc
gacggccactcgctggcctaccgcgcgttcttcgcgctgccggtggagaacttctccacc
accaccggccagcacacgaacgccgtctacggcttcacctcgatgctcatcaacgtgctg
cgcgacgagcagcccacgcacgtcgcggtcgccttcgacgtctcgcggcagaccttccgc
ctggaggagtacgccgagtacaaggccaagcgggccaagtcgccgggggagttcagcagc
cagctgccgctgatcgaggaggtgctcgacgcgctgcggatcccgttcctgaagaaggac
ggctacgaggccgacgacatcatcgccacgctgaccacccaggcgctcgccgacggcatg
gaggtgctgatcctcaccggtgaccgcgactccctgcagctggtcaccgaccgctcgacg
gtgctctacccgatgcgcggggtctccgacctggcccggatgacgcctgaggcggtcgag
gcgaagtacggcgtgcccccgcaccgctaccccgagatcgccgcgatcgtgggggagacc
tccgacaacctcccgggcgtgcccggggtcggcgtcgggttcgccgcgaagtggatcaac
acctacgacggcctcgacaacgtcatcacccacgccgacaagatcaccggcaagaagggc
gaggcgctgcgcgcccacctcggcgacgtcatccgcaaccgccggctcaacgcgctcgtg
cgcgacctggacctcgagctcgccccggcggacctggcgatccggccgtgggaccgccag
gaggtccacacgctcttcgacggcctggagttccgggtgctgcgcgaccggctcttcgag
acgctcagctcggaggaggagatcgacgactccgggttcgacgtggcgatgagcgtgctc
ggcgccggcgagctggccggctggctggccgagcacgcctccggcggtgaccgggtcggc
gtgcacgtcgcgggtcgctggggcgccggcaccggcgacgtcgacgcgctggccctggcg
acggtggagggggcggcggcgtacgtcaccgccgagacgatggaccccgccgacgaggag
gcgctgcgcgcctggctcgcggacccggcccgactcaaggtgctccacgacgccaagggg
ccgatcctggcgctcgacgcgtggggcatgccgctggccggcctcgcccgcgacaccgcg
ctgtcggcgtacctcgcgcgccccgaccagcgctcctacgacctcgccgacctcaccgtg
cgctacctcaagcgcgagctgcgcacgggcccggccgacgacggccagctcagcctcgac
gggatcaccgacgaggcggcggggcaggtcgagatgctgcacgcccgcgccgtgctcgac
ctggccgccgcgctggacgaggagctcgccgaccgcggcgggacccgcctgctggaggac
atcgagctgccgctggtcgacctgctggccacgatggagcgcaccggcatcgccgtcgac
accgagcacctcgaggacctcgagcggcacttcgccggcgaggtgaagctcgccgccgag
gacgcctacgccgtcatcggcaaggagatcaacctcggctcgcccaagcagctgcaggtg
gtgcttttcgacgagctcgacatgccgaagaccaagcgcaccaagaccggctacaccacc
gacgccgacgcgctccaggcgctctacgtcaagaccgagcaccccttcctgctgcacctg
ctgcggcaccgcgacgtcgcgcggctgcgccagacgatcgaggggctgctcaagacggtg
gcgcccgacgggcggatccacaccaccttcaaccagacgatcgccgcgaccggtcgcctc
tccagcaccgacccgaacctgcagaacatcccggtgcgcaccgaggagggccgccggatc
cgcgaggcgttcgtcgtcggccccggctacgagtcgctgatgacggccgactacagccag
atcgagatgcggatcatggcgcacctctcggaggacgccctgctcatcgacgccttccgg
tccgggcgcgacttccactccgtcaccgccgcgcgggtcttcgacgtccccgccgaggag
gtcgggcccgagcagcgcgccaagatcaaggcgatgaactacggcctggcctacgggctg
tcggcctacgggctgagccagcagctgacgatcgacccggccgaggcgcgggtgctcatg
gatgagtacttcgagaccttcggcgggatccgcgactacctcggcggcgtggtcgacgtg
gcccggcgcagcggctacaccgagaccatctacggtcgccgccgctacctgccggacctg
accagcgacaaccggcagcgccgggagatggccgagcggatggcgctcaacgccccgatc
cagggctcggccgcggacctgatcaagatcgcgatgctcaacgtcgacaaggccatccgt
gaggccggcctgcggtcgcggatgctcctccaggtccacgacgagctcgtgctcgaggtg
gccgagggcgagcgcgaggcgctcgagacgctggtacgccgcgagatggccggcgccgcc
gacctcgccgtccccctcgacgtctcggtcggcaccggccgcagctggcacgacgccgcc
cactga
DBGET
integrated database retrieval system
