Nocardioides marmotae: HPC71_08395
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Entry
HPC71_08395 CDS
T09088
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar00061
Fatty acid biosynthesis
nmar00071
Fatty acid degradation
nmar01100
Metabolic pathways
nmar01212
Fatty acid metabolism
nmar02024
Quorum sensing
nmar04146
Peroxisome
Module
nmar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HPC71_08395
00071 Fatty acid degradation
HPC71_08395
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HPC71_08395
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPC71_08395
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nmar01004
]
HPC71_08395
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmar04147
]
HPC71_08395
Enzymes [BR:
nmar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HPC71_08395
Lipid biosynthesis proteins [BR:
nmar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HPC71_08395
Exosome [BR:
nmar04147
]
Exosomal proteins
Exosomal proteins of breast milk
HPC71_08395
Exosomal proteins of breast cancer cells
HPC71_08395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QKE01087
LinkDB
All DBs
Position
complement(1737606..1738853)
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AA seq
415 aa
AA seq
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MTSPARPQLATGDRVALLVPGSTTYLDAVLSLLARGVFPIPLDPRLTPHERDRVLAGLDP
TLVVEDEATLAALVDPGCRRRLPRGRPMHVTSGTTGTPKGVFSGLLGEDDARALVAEERD
LWGFAADDVNLVLSPLYHSAPLRFAMGTALAGGRVVVPGPFDPARVTAAIVAERPTTMFC
VPTHLQRLFAHWDAEGWPDLSCFRLVAHAGAPCPDAVKRRLVEAFPAGSTWEFYGSTEGQ
FTACRSEEWLERPGTVGRARPGRRLRVAEDGTIWCAVPDFARFTYYGAPEKTAAAWQGTE
FTVGDLGRLDDDGYLFLDGRREDLVISGGVNVYPLEVEQTLREHPGVEDVAVYGVPDEQW
GQRVCAAVVGTAAEADLATYVRERLAPPKRPKTWSFLEELPRTLTGKVLRARLPR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccccggcccgcccccagctcgcgaccggcgaccgggtcgccctcctggtgccc
ggctcgacgacgtacctcgacgcggtgctctcgctgctcgcccgcggggtcttccccatc
ccgctcgacccgcgcctgacgccccacgagcgcgatcgcgtcctcgccgggctcgacccc
acgctggtcgtcgaggacgaggcgacgctggcggccctggtcgacccgggctgccgtcgc
aggctgccgcggggccggccgatgcacgtcaccagcggcaccaccggcaccccgaagggg
gtcttcagcggcctgctcggcgaggacgacgcccgggcgctcgtcgcggaggagcgcgac
ctgtggggcttcgccgccgacgacgtgaacctggtgctcagcccgctctaccactcagcg
cccctgcgcttcgcgatgggcacggcgctggccggcggccgggtggtcgtgccaggcccg
ttcgatcccgcccgggtcaccgcggcgatcgtggccgagcggcccaccacgatgttctgc
gtgccgacccacctccagcggctcttcgcgcactgggacgccgaggggtggccggacctc
tcctgcttccggctcgtcgcccacgcgggcgcgccctgccccgatgcggtcaagcggcgc
ctggtcgaggcgttccccgcggggtcgacatgggagttctacggctcgaccgagggtcag
ttcaccgcctgccgcagcgaggagtggctcgagcggcccggcaccgtcgggcgggcccgc
cccggccggcggctgcgcgtcgccgaggacggcacgatctggtgcgccgtgcccgacttc
gcccggttcacctactacggcgcacccgagaagaccgcggccgcctggcagggcacggag
ttcaccgtcggcgacctcggccgcctcgacgacgacggctacctcttcctcgacggtcgc
cgggaggacctggtgatcagcggcggggtcaacgtctacccgctcgaggtggagcagacc
ctgcgcgagcacccgggggtcgaggacgtcgcggtgtacggcgtgcccgacgagcagtgg
ggccagcgggtgtgcgccgcggtggtcgggaccgcggccgaggccgacctggcgacgtac
gtccgcgagcggctggcgccgccgaagcggccgaagacctggtccttcctcgaggagctc
ccccgcaccctgaccgggaaggtgctgcgcgcccggctgccccggtga
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