Nocardioides marmotae: HPC71_12275
Help
Entry
HPC71_12275 CDS
T09088
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPC71_12275 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nmar01007
]
HPC71_12275 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmar03016
]
HPC71_12275 (aspS)
03029 Mitochondrial biogenesis [BR:
nmar03029
]
HPC71_12275 (aspS)
Enzymes [BR:
nmar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HPC71_12275 (aspS)
Amino acid related enzymes [BR:
nmar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPC71_12275 (aspS)
Transfer RNA biogenesis [BR:
nmar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPC71_12275 (aspS)
Prokaryotic type
Other AARSs
HPC71_12275 (aspS)
Mitochondrial biogenesis [BR:
nmar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HPC71_12275 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QKE01757
LinkDB
All DBs
Position
complement(2544694..2546484)
Genome browser
AA seq
596 aa
AA seq
DB search
MIRTHDAGALRAEHVGQTVTLAGWVANRRDHGGVAFIDLREASGVVQVVIRDEEVAHQLR
AEFCLKVTGEVTARKEGNENPNLATGEIEVVATEVEVLSTAAPLPFPISDAQSSSGEVGE
EVRLKYRYLDLRRSGPAAAIRLRSKVNKAARDVLDRHDFVEIETPTLTRSTPEGARDFLV
PARLHPGSWYALPQSPQLFKQLLMVGGMERYYQIARCYRDEDFRADRQPEFTQLDIEMSF
VDQEDVIALMEDVLAEMWALIDVEIPRPIPRMTYAEAMAKYGSDKPDLRMGNELVECTEY
FKDTPFRVFQAEYVGAVVMPGGASQPRKQLDAWQEWAKQRGARGLAYVLVQEDGTLGGPV
AKNLTEEEKAGLAAHVGAQPGDCIFFAAGATKSSRALLGAARLEIGRRCGLIDTSAFAFT
WVVDAPLFEPASEAVASGDVAVGAGAWTAVHHAFTSPKPEYLDTLEENPGAALAYAYDIV
CNGSELGGGSIRIHREDVQKRVFSVMGIGEEEAQEKFGFLLDAFKYGAPPHGGIAVGMDR
ICAILAGADSIRDVIAFPKSGGGFDPLTAAPAPITPAQRKEAGVDAEPAKDVADPA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgcacccatgacgccggcgccctccgcgccgagcacgtcggccagaccgtcacc
ctcgccgggtgggtggccaaccgacgcgatcacgggggcgtcgccttcatcgacctccgc
gaggccagcggcgtcgtccaggtcgtcatccgcgacgaggaggtcgcccaccagctgcgc
gcggagttctgcctcaaggtcactggcgaggtgaccgcgcgcaaggagggcaacgagaac
cccaacctcgccaccggcgagatcgaggtcgtcgccaccgaggtcgaggtgctcagcacc
gccgcgccgctgccgttccccatcagcgacgctcagtcgtcgagtggggaggtgggggag
gaggtccgcctcaagtatcgctacctcgacctgcgccgctccggcccggccgccgcgatc
cgcctgcgcagcaaggtcaacaaggccgcgcgcgacgtgctcgaccgccacgacttcgtc
gagatcgagacccccacgctgacccgcagcacccccgagggtgcccgcgacttcctcgtc
ccggcgcgcctgcacccgggcagctggtacgccctgccgcagagcccccagctgttcaag
cagctgctcatggtcggcggcatggagcgctactaccagatcgcgcgctgctaccgcgac
gaggacttccgcgccgaccggcagccggagttcacccagctcgacatcgagatgtccttc
gtcgaccaggaggacgtcatcgcgctgatggaggacgtcctcgccgagatgtgggcgctc
atcgacgtcgagatcccgcgcccgatcccgcggatgacctacgccgaggcgatggccaag
tacggctcggacaagcccgacctgcggatgggcaacgagctcgtcgagtgcaccgagtac
ttcaaggacacccccttccgcgtcttccaggccgagtacgtcggcgcggtggtcatgccg
ggcggcgcgagccagccccgcaagcagctcgacgcctggcaggagtgggccaagcagcgc
ggcgcccgcgggctggcctacgtgctcgtccaggaggacggcaccctcggcggccccgtc
gccaagaacctcaccgaggaggagaaggccggcctcgccgcgcacgtcggcgcccagccg
ggcgactgcatcttcttcgccgccggtgccaccaagtccagccgcgccctcctcggcgcg
gcgcgcctggagatcggccgccgctgcgggctgatcgacacctcggcgttcgccttcacc
tgggtcgtcgacgcgccgctcttcgagcccgccagcgaggcggtcgccagcggcgacgtc
gccgtcggcgccggcgcctggaccgcggtgcaccacgccttcaccagccccaagccggag
tacctcgacaccctcgaggagaaccccggcgcggcgctggcctacgcctacgacatcgtc
tgcaacggcagcgagctcggcggcgggtcgatccggatccaccgcgaggacgtccagaag
cgcgtcttctcggtgatgggcatcggcgaggaggaggcgcaggagaagttcggcttcctc
ctcgacgccttcaagtacggcgcgcccccgcacggcggcatcgccgtgggcatggaccgc
atctgcgcgatcctcgccggtgcggactcgatccgcgacgtcatcgccttcccgaagtcc
ggtggcgggttcgacccgctcacggccgcgcccgcacccatcacccctgcccagcgcaag
gaagccggtgtcgacgccgagccggcgaaggatgttgcggacccggcctga
DBGET
integrated database retrieval system
