Nocardioides marmotae: HPC71_12920 Help Entry HPC71_12920       CDS       T09088                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism nmar  Nocardioides marmotae Brite KEGG Orthology (KO) [BR:nmar00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nmar03400]     HPC71_12920 Enzymes [BR:nmar01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      HPC71_12920     5.6.2.6  RNA 3'-5' helicase      HPC71_12920 DNA repair and recombination proteins [BR:nmar03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     HPC71_12920 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AAA_25 AAA_22 Cas3-like_C_2 DUF6406 Motif Other DBs NCBI-ProteinID:  QKE01868 LinkDB All DBs Position 2680168..2684814 Genome browser AA seq 1548 aa AA seqDB search MDDVPDPTDPADALARFSDATRTWFGAAFAAPTPAQQGAWAAIDAGRHALVVAPTGSGKT LSAFLWSLDRLLSEPRPEDKQKRCRVLYVSPLKALAVDVERNLRTPLTGIRQTADRLGTT VPEVRVGVRSGDTPAADRRKLVTDPPDIMITTPESLFLMLTSQARESLRGVETVILDEVH AVAGTKRGAHLALTLERLDALLDRPAQRVGLSATVRPLDEVARFLGGSAPVEIVAPPSTK EWDLKVVVPVEDMTAPEQYDEDSEEPARAQSIWPHVEERVVDLIEEHRSTIVFANSRRLA ERLTARLNEIATARAAPDADALERQTGGGQTGPPAQVMAQSGSSRPVSADDPYATVVAKA HHGSVSKEQRALIEDDLKRGRLPAVVATSSLELGIDMGAVDLVVQIESPPSVASALQRVG RAGHQVGEVSRGVLFPKHRGDLAQTAVAVERMRAGAIESLRVPANPLDVLAQQVVAATAM EPWPVDDLFDLVRRTASFAQLPRSAYDAVLDLLAGRYPSDEFAELRPRIVWDRVTGTLTG RPGAQRLAVTSGGTIPDRGLFGVFLVGGEGPGKRVGELDEEMVYESRVGDIFALGATSWR IEDITHDRVLVTPAPGIPGRLPFWKGDAPGRPAELGTAIGAFTRELGALPPPKAEQVARE RGLDEYAAANLVAYLHEQLEATNVLPSDRTLVVERFRDELGDWRLVLHSPFGTPVHAPWA LAINARLRERYGIDGQAVASDDGIVIRIPDTDAEPPGGDVIVFEADEIDDLVTTEVGGSA LFAARFRECAARALLLPRRDPGRRSPLWQQRQRSAALLEVASKYPSFPIVLEAVRECLQD VYDLPALVALMRSIDRREVRVVDVSTHAPSPFARSLLFGYVAQFMYEGDSPIAERRAAAL SLDQGLLAELLGRAELRELLDPDVLAEVEAELQRLHPDRRARDAEGVADLLRGLGPLTTA EVAERCVEGADVAGWLRTLADARRVTEVRMAGEERWSSIEDVGRLRDGLGVAVPPGTPSV FTEPVEDPLADLVSRYARTHGPFTTEQCADRLGLGQAVVRHTLQRLAGQGRVLDGEFRPS GAGSEWCDAEVLRRLRRRSLARLRKEVEPVEPAALGRFLTAWQHVDTGSGRGPRGVDGVL TVVEQLAGCPVPASALEPLVLSARVRDYESSYLDELTASGEVVWAGHGALPGSDGWISLH LADSAHLTLPEPEPFEHSELHQALLDALAPGGAYFFRQLADTVTGSLGATPDAAVSAALW DLVWAGRISNDTLTPLRGLVRGGSASHRTKRAAPRVRMSQTTRGRMPARTGPPETAGRWA VLPAIDEDPTRRAHAAAERLLDRHGVVIRGAVVSERLPGGFAAAYKVLSAFEDSGRCRRG YFVDGLGAAQFGTAGAIDRLRTFAEVDPDAKPVAVALAATDPANPYGAALPWPERVVESD AADGKPGAGHRPGRKAGAMVVLVDGVLTMYVERGGRTLLTWADDEERLVPAAQALAEAAR RGSLGRLTVERADGEQLLGSGSTPLREALTAAGFVSTPRGLRLRGAGA NT seq 4647 nt NT seq  +upstreamnt  +downstreamnt atggacgacgtgcccgacccgaccgaccccgctgacgccctggcgcgcttcagcgacgcg acccgcacctggttcggtgcggccttcgcggcgccgacgccggcccagcagggtgcgtgg gcggcgatcgatgcgggccggcacgcgctggtcgtggcgccgaccggctcgggcaagacc ctctcggcgttcctgtggtcgctggaccggttgctctccgagccgcgccccgaggacaag cagaagcgctgccgcgtcctctacgtctccccgctcaaggcgctggccgtcgacgtggag cgcaacctgcgcacgccgctgaccggcatccggcagaccgccgaccggctgggcacgacg gtgcccgaggtgcgggtcggcgtgcgctccggcgacaccccggccgccgaccggcgcaag ctggtgaccgacccgcccgacatcatgatcacgacccccgagtcgctgttcctgatgctc acctcccaggcccgcgagtcgctgcgcggggtggagacggtcatcctcgacgaggtccac gccgtcgccggcaccaagcgcggcgcgcacctcgccctgaccctcgagcgcctcgacgcc ctgctggaccgacccgcgcagcgggtcggcctctccgccacggtccgcccgctcgacgag gtggcccgcttcctcggcggctccgcgccggtggagatcgtggcgccgccctcgacgaag gagtgggacctcaaggtcgtggtcccggtcgaggacatgaccgctccggagcagtacgac gaggattccgaggagcccgcccgcgcgcagtcgatctggccgcacgtcgaggagcgggtg gtcgacctgatcgaggagcaccgctcgacgatcgtcttcgccaactcccggcggctggcc gagcggctgaccgcccggctcaacgagatcgccaccgcgcgggccgcccccgacgccgac gccctcgagcggcagaccggcggcggtcagaccggcccgccggcgcaggtgatggcgcag tccggctcctcgcgcccggtctcggccgacgacccgtacgccaccgtcgtcgccaaggcc caccacggctcggtctccaaggagcagcgcgccctcatcgaggacgacctcaagcgcggc cggctccccgcggtggtcgccaccagcagcctcgagctcggcatcgacatgggcgcggtc gacctcgtcgtccagatcgagtccccgcccagcgtcgcctccgcgctccagcgcgtcggg cgggccggccaccaggtcggcgaggtctcccgcggcgtgctgttccccaagcaccgcggc gacctcgcccagaccgctgtcgccgtcgagcggatgcgcgccggcgcgatcgagtccctg cgcgtcccggccaaccccctcgacgtgctcgcccagcaggtcgtcgcggccaccgcgatg gagccctggccggtcgacgacctcttcgacctggtccgccgcaccgcctccttcgcccag ctgccccgctcggcgtacgacgccgtgctggacctgctcgccgggcgctacccctccgac gagttcgccgagctccgcccccgcatcgtgtgggaccgggtcaccggcaccctcaccggg cggccgggcgcgcagcggctggcggtgaccagcggcggcacgatccccgaccgcggcctg ttcggcgtcttcctcgtcggcggcgagggccccggcaagcgggtcggcgagctggacgag gagatggtctacgagtcccgcgtgggcgacatcttcgccctcggcgcgaccagctggcgg atcgaggacatcacccacgaccgggtcctcgtcacccccgcgccgggcatccccggccgg ctgccgttctggaagggcgacgcccccggccgccccgccgagctcggcaccgccatcggc gccttcacccgcgagctcggcgccctgccgccgccgaaggccgagcaggtcgcccgcgag cgcggcctcgacgagtacgccgccgccaacctggtggcctacctccacgagcagctcgag gccaccaacgtgctgcccagcgaccgcaccctggtggtggaacggttccgcgacgagctc ggcgactggcgcctggtgctgcactcccccttcggcacgcccgtccacgcgccgtgggcg ctggcgatcaacgcccgcctgcgcgagcggtacggcatcgacggccaggcggtcgcctcc gacgacggcatcgtcatccggatccccgacaccgacgcggagccgcccggcggcgacgtg atcgtcttcgaggccgacgagatcgacgacctggtcaccaccgaggtcggcgggtccgcg ctgttcgccgcccggttccgcgagtgcgcggcccgcgcgctgctgctgccccggcgcgac cccgggcggcgctccccgctgtggcagcagcggcagcgctccgcggccctgctcgaggtc gcctcgaagtacccctccttccccatcgtcctggaggccgtccgcgagtgcctccaggac gtctacgacctgcccgccctggtcgccctgatgcgcagcatcgaccggcgcgaggtccgc gtcgtcgacgtctcgacccacgccccgtcgccgttcgcccgcagcctgctcttcgggtac gtcgcccagttcatgtacgagggcgactcccccatcgccgagcgccgcgcggccgccctc tccctggaccagggcctgctggccgagctcctgggccgcgccgagctgcgcgagctgctc gaccccgacgtgctcgccgaggtcgaggccgagctgcaacggctccaccccgaccgccgc gcccgcgacgccgagggcgtcgcggacctgctgcgcgggctcggcccgttgaccaccgcc gaggtcgccgagcgctgcgtcgagggcgccgacgtcgccggctggctgcgcacgctggcc gacgcccgccgggtcaccgaggtccggatggccggggaggagcgctggagctcgatcgag gacgtcggccgcctgcgcgacggcctcggcgtcgccgtcccgccggggacgccgtcggtc ttcaccgagccggtcgaggacccgctcgccgacctggtctcgcgctacgcccgcacccac ggccccttcaccaccgagcagtgcgcggaccggctcggcctgggccaggccgtcgtccgg cacaccctccagcgcctcgccggccagggccgggtcctcgacggtgagttccgtccctcc ggcgccgggtcggagtggtgcgacgccgaggtgctgcgccggctgcgccgccgctccctg gcccgactccgcaaggaggtcgagccggtcgagccggccgccctcggccggttcctcacc gcgtggcagcacgtcgacaccggctcgggccgcggcccgcggggcgtcgacggggtgctg accgtggtcgagcagctcgccggctgcccggtccccgcctccgcactggagccgctggtg ctctccgcgcgggtgcgcgactacgagtcctcctacctcgacgagctgaccgcctccggc gaggtcgtctgggccgggcacggcgccctgcccggctccgacggctggatctccctgcac ctggccgactccgcgcacctgacgctgcccgagcccgagccgttcgagcacagcgagctc caccaggcgctcctcgacgcgctcgcccccggcggggcctacttcttccgccagctcgcc gacaccgtgaccggctccctcggcgccacccccgacgccgccgtctccgccgcgctgtgg gacctggtctgggcgggccggatcagcaacgacaccctcaccccgctgcgggggctggtc cgcggcggctcggcgagccaccgcaccaagcgcgccgcgccgcgggtgcggatgtcgcag accacccgggggcggatgcccgcccgcaccggcccgccggagacggccggccgctgggcg gtgctgcccgcgatcgacgaggaccccacccggcgcgcgcacgccgccgccgagcggctg ctggaccggcacggcgtggtgatccgcggggcggtggtgagcgagcggctcccgggcggg ttcgcggcggcgtacaaggtgttgtcggcgttcgaggactccgggcgctgccggcgcggc tacttcgtcgacggcctgggggccgcgcagttcggcaccgccggggcgatcgaccggctc cgcacgttcgccgaggtcgaccccgacgccaagccggtcgccgtcgccctggccgcgacc gacccggcgaacccctacggcgccgcgctcccctggcccgagcgcgtcgtggagagcgac gccgccgacgggaagcccggcgccggtcaccggcccggacgcaaggccggcgcgatggtg gtgctcgtcgacggcgtgctgacgatgtacgtcgagcgcggcgggcgcaccctgctgacc tgggccgacgacgaggagcgcctcgtcccggccgcccaggcgctcgccgaggccgcccgc cgcggctcgctgggccggctcaccgtggagcgggccgacggcgagcagctgctcggctcg ggctccacgccgctgcgcgaggcgctcaccgcggccggcttcgtctccaccccccggggc ctgcggctgcgaggcgccggtgcctga

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