Nocardioides marmotae: HPC71_15755
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Entry
HPC71_15755 CDS
T09088
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar03420
Nucleotide excision repair
nmar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPC71_15755
03430 Mismatch repair
HPC71_15755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmar03400
]
HPC71_15755
Enzymes [BR:
nmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPC71_15755
DNA repair and recombination proteins [BR:
nmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPC71_15755
MMR (mismatch excision repair)
Other MMR factors
HPC71_15755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
HRDC
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
QKE02358
LinkDB
All DBs
Position
complement(3297675..3299696)
Genome browser
AA seq
673 aa
AA seq
DB search
MTRPEDLLAALDPEQRTVAEALRGPVRVLAGAGTGKTRAITHRIAYGVATGVYAPTEVLA
VTFTTRAAGEMRGRLRTLGAGGVQARTFHSAALRQLRYFWPHVHGTELPQLIESKIGLLA
SAARRQRISADQALLRDLASEVEWAKVSNVHPDDYARVAPERGRSVTNLDPGTVGRVFGS
YEDAKREAGRMDMEDILLLTAGMLAEDERVAAQVRRQYKWFVVDEFQDVSPLQSALLDLW
LGGRNEICVVGDPAQTIYSFAGANADYLRDFPKRHPGTTSVELVRNYRSTPQVVEAANTL
LAGTPSQGVDLRAQRPAGPPVTYQARPDEVAEAEEVAARILKLRDAGRPLGEIAILFRIN
ALSEAFEEALSARRIPYVVRGASRFFDRPEVREAVTRIRGAARSGEGVGVVDTVTATLAG
MGWTAEAPAARGQTRDRWESWQALVDQASEFESGGGDLEAFVDDLDRRAAEQHAPVAEGV
TLATFHAAKGLEWDSVFLCGLQDGTLPITYADTPLAVEEERRLLYVGMTRARLDLALSWA
AARNPGGRASRRPSRFLDPLLPEDTRPQDGPRRRKVAGCRECGKPLTSAVEKKRGRCHDC
PASYDEELFERLRTWRKERADTESVPAFVVFTDATLQLIAEHKPRTPEAMLRISGIGRSK
VEKYGEDVLELVG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccccgaggacctgctcgccgcgctcgacccggagcagcgcacggtcgcggag
gcgctgcgcgggccggtccgcgtgctggccggcgccggcaccggcaagacccgcgcgatc
acccaccgcatcgcgtacggcgtcgcgaccggcgtctacgccccgaccgaggtcctggcg
gtcaccttcaccacccgcgcggccggcgagatgcgcggccggctgcgcacgctcggggcc
ggcggcgtccaggcgcgcacgttccactccgcggcgctgcggcagctgcggtacttctgg
ccgcacgtccacggcaccgagctgccgcagctgatcgagtccaagatcgggctgctggcc
tcggccgcgcggcggcagcggatctcggcggaccaggcgctgctgcgcgacctggcctcg
gaggtggagtgggccaaggtcagcaacgtccaccccgacgactacgcccgggtcgcccct
gagcgcgggcgcagcgtcaccaacctcgaccccggcacggtcggccgggtcttcggcagc
tacgaggacgccaagcgcgaggccggccggatggacatggaggacatcctcctgctgacc
gccggcatgctcgccgaggacgagcgggtggccgcgcaggtccgccggcagtacaagtgg
ttcgtcgtcgacgagttccaggacgtctcgccgctccagtcggcgctgctcgacctctgg
ctcggtggccgcaacgagatctgcgtggtcggcgaccccgcccagacgatctactccttc
gccggcgccaacgccgactacctgcgcgacttccccaagcgccaccccgggaccacctcg
gtcgagctggtccgcaactaccgctcgaccccccaggtggtcgaggccgcgaacacgctg
ctggccggcacccccagccagggcgtcgacctgcgcgcccagcgcccggccggcccgccg
gtgacctaccaggcgcgccccgacgaggtcgcggaggccgaggaggtcgccgcgcggatc
ctcaagctccgcgacgccggccgcccgctcggcgagatcgccatcctcttccgcatcaac
gctctctccgaggccttcgaggaggcgctgtccgcgcgccgcatcccctacgtcgtccgc
ggcgccagccggttcttcgaccgaccggaggtccgcgaggcggtcacccggatccgcggc
gccgcccgctccggcgagggcgtcggcgtcgtcgacaccgtgaccgcgacgctcgccggg
atgggctggaccgccgaggcgccggccgcccgcggccagacgcgggaccggtgggagtcc
tggcaggcgctcgtcgaccaggccagcgagttcgagtccggcgggggagacctcgaggcg
ttcgtcgacgacctcgaccgccgggccgccgagcagcacgcgccggtcgccgagggcgtc
acgctcgccaccttccacgccgccaagggcctggagtgggactcggtgttcctgtgcggc
ctccaggacggcacgctgccgatcacgtacgccgacaccccgctggcggtggaggaggag
cgccggctgctctacgtcgggatgacccgcgcccggctcgacctcgccctgtcctgggcg
gcggcccgcaaccccggcggccgcgcgtcgcgccggccctctcggttcctcgacccgttg
ctgcccgaggacacccggccccaggacgggccgcggcggcgcaaggtcgccggctgccgc
gagtgcggcaagccgctgacctcggcggtcgagaagaagcgcggccgctgccacgactgc
ccggcgtcgtacgacgaggagctcttcgagcggctgcgcacctggcgcaaggagcgcgcc
gacaccgagtcggtcccggcgttcgtcgtcttcaccgacgccaccctccagctcatcgcc
gagcacaagccgcgcacgcccgaggcgatgctgcggatcagtggtataggccggtcgaag
gtcgagaagtacggcgaggacgtgctcgagctcgtcgggtag
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