Nocardioides marmotae: HPC71_16845
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Entry
HPC71_16845 CDS
T09088
Name
(GenBank) ATP-binding cassette domain-containing protein
Organism
nmar
Nocardioides marmotae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_29
AAA_25
AAA_5
AAA_22
RsgA_GTPase
AAA_16
nSTAND1
AAA_23
DUF87
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
QKE02548
LinkDB
All DBs
Position
complement(3541781..3545377)
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AA seq
1198 aa
AA seq
DB search
MTVTTPTAAERGTPPTQPGAGGSPQLPESRVVDWRRLRSRVAAAALVALFIAALGQALGT
VVAGRLAAEPSNRLVLLLALCVVGAAVLDSAARVVWSGVVDRAEGRLRADLLDAALAQPL
ARLDDQAVGEVLDRVDDDTYEVGTLVRRQVWDTLRTLFATVPMWVIAGLTWWPAWLLLPA
VSAVTILVVRPLLPEISRRKVLEEMAWTDHAAALEEGVAGRDDLRTSLGQAHVVRRVAEL
SAEIHRRLGSVLVVEMRLARRAGLLLHGLLAAVVVSGVALTSSDSMSVARLVTLFLVTST
FVGQINNLAQHLPELQAGLGALIRLRQMLESPPEPAGGRPVPEGPLDLRFRDLHFAYEEG
RFALEGVDLLVPAGETCALVGRTGSGKSTLAALVSRAVEPEPGTVLLGGVDVLDLDLQQL
RATVGVVTQRTEILAGTLAENIALFGDVPAGRVEAALAELGLESWVAGLPQGVDTPLGPG
GTTLSAGEEQLVAFARLLVRDVRVVVLDEATARMDPVTEELVVRAADRLLARRTGLLVAH
RLGTVERAGLVAVLDQGHVVQQGRHADLATAPGRFRDLLRSGDGDHEAAPALARTAPDPD
PDPDPAAAPAPEPGPAPTAVGGTRRTGAPPERPEVGDGPSLSRGILHALVLHPRWGLAGV
LLFLVGSLTGAFGVLTGWAWGRLVADLTEGRTPTALTAVVVVSLLLAPLALAAAFSRYPQ
WWVAVLLRTRMAVLIGQTQQRRLSRTPPGEVVARTMDADRYARYADRWVDFSTGLVIVVA
TSVAGGSLLAGGVLLAVMVASALASSFGRPLAGRSAAAASRARAGFGRSLVSVLDCVRTV
KLAAATPAVRRHLARVDSGRVDAAVHEHRVQAALDGVPVVVVQCGVVAAWAVLVAGHWDL
ATALLVSSAVNGFDWFGRVAGSVITEAPGTRSWQRATSRLAGGTDLMTLPPGVDLVSGVA
PGPAPTPRVPLRRLELRGVDAIHDDGTRGVTGVDLDVDAGDLVLLLGQVGSGKSSLLAAL
AGLVDHTGAIRWNGRDVEDPEVFLRPGQVAHVAQVPRVLSGTFADNVVLDHTVERGLDAA
VADARLGRDLEDAGGPRALVGHRGVRLSGGQVQRLALARALATDAELLLADDVSSALDAA
TELELWDALRARGTTVVGATSKRAALARADRVVVLVDGRVAASGPWSELAEAWGHLAG
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcacgaccccgaccgcagccgagcgcggcacaccccccacccagcccggcgcc
ggcgggtcgccgcagctgccggagtcccgcgtcgtcgattggcgccggctgcgctcgcgc
gtggccgccgcggccctcgtcgcgctgttcatcgccgcgctcgggcaggccctcggcacc
gtcgtggccggccggctcgccgccgagcccagcaaccggctggtgctgctgctcgcgctg
tgcgtggtgggcgccgccgtgctcgactccgcggcccgggtggtgtggtcgggggtcgtc
gaccgcgccgagggtcggctgcgtgccgacctcctcgacgccgccctcgcccagcccctc
gcccgcctcgacgaccaggccgtcggcgaggtgctcgaccgggtcgacgacgacacctac
gaggtcggcaccctggtccgccgccaggtgtgggacaccctgcggacgctgttcgccacc
gtgccgatgtgggtcatcgccgggctcacctggtggccggcgtggctgctcctccccgcg
gtgagcgcggtgaccatcctggtcgtgcgcccgctgctgccggagatctcccgccgcaag
gtgctggaggagatggcctggaccgaccacgccgccgcgctcgaggagggtgtcgccggc
cgcgacgacctacgcacgagcctcggccaggcccacgtcgtacgacgcgtcgcggagctc
tccgccgagatccaccgtcgcctggggtcggtgctcgtggtggagatgcgcctcgcgcgc
cgggccgggctgctgctgcacgggctgctggccgcggtcgtggtctccggggtcgccctg
acatcctcggactcgatgtcggtggcgcggttggtgacgctgttcctggtcacctcgacc
ttcgtcgggcagatcaacaacctcgcccagcacctgcccgagctgcaggccggcctcggt
gcgctgatccggctgcggcagatgctcgagtcgcccccggagcccgcgggcgggcggccg
gtccccgaggggccgctggacctgcgcttccgcgacctgcacttcgcctacgaggagggc
cggttcgcgttggagggggtcgacctgctcgtgcccgcgggggagacctgcgccctcgtc
ggccgcaccggctcggggaagtcgacgctggccgccctcgtctcccgcgcggtcgagccc
gagccggggaccgtgctgctcggcggcgtcgacgtgctcgacctcgacctgcagcagctg
cgggccaccgtcggggtggtcacccagcgcaccgagatcctcgccggcaccctcgccgag
aacatcgccctcttcggcgacgtcccggccggtcgggtcgaggccgcgctcgccgagctc
gggctcgagagctgggtcgccggcctcccgcagggcgtggacaccccgctgggtcccggc
ggcacgacactgtccgcgggggaggagcagctggtcgcgttcgcgcggctgctcgtccgc
gacgtgcgcgtcgtcgtgctcgacgaggccaccgcccggatggacccggtcaccgaggag
ctggtcgtccgcgctgccgaccggctgctcgcgcggcgtaccggcctgctcgtcgcccac
cggctcggcaccgtcgagcgcgccgggctggtggcggtgctcgaccaggggcacgtcgtg
cagcagggccggcacgcggacctggcgaccgctcccggccggttccgcgacctgctgcgc
tccggcgacggggaccacgaggccgcccccgccctcgcccgcactgcccccgaccccgac
cccgaccccgaccccgccgccgctccggccccggagcccggccccgcgccgaccgcggtc
ggcggcacccgccgcaccggcgcgcccccggagcgccccgaggtcggcgacgggccctcg
ctgagccgcggcatcctccacgcgctcgtgctgcacccccgctggggcctggccggcgtc
ctgctcttcctcgtcggctcgctgaccggtgcgttcggcgtgctgaccgggtgggcctgg
ggccgcctggtggcagacctgaccgagggccgcacgccgaccgcgctcacggcggtcgtc
gtcgtgagcctcctgctcgcgccgctcgcgctggccgcggcgttcagccgctacccgcag
tggtgggtcgcggtcctgctgcgcacccggatggcggtcctcatcggccagacccagcag
cggcggctctcgcggacgccgccgggcgaggtggtcgcgcggacgatggacgccgaccgc
tacgcccggtacgccgaccgctgggtggacttctcgaccggactggtcatcgtggtggcc
accagcgtggccggcggcagcctgctcgccggcggggtgctgctcgcggtgatggtcgcc
tcggcgctcgcctcgtccttcggccgccccctcgccggccgctcggcggcggccgcgtcg
cgggcccgcgccggcttcggccgctcgctggtctcggtgctcgactgcgtgcggaccgtc
aagctcgccgcggcgaccccggcggtccggcgccacctcgcccgcgtcgactccggccgg
gtggacgccgcggtccacgagcaccgcgtgcaggccgcgctcgacggcgtcccggtggtc
gtcgtccagtgcggcgtggtcgccgcgtgggccgtcctcgtggccggccactgggacctc
gccaccgcgctgctggtctcctcggcggtcaacggcttcgactggttcggccgggtcgcg
gggtcggtcatcaccgaggcgccgggcacccgctcctggcagcgggccaccagccggctc
gccggcggcaccgacctgatgacgctgccgcccggggtcgacctggtgagcggggtggcg
cccgggccggcgccgaccccgcgggtcccgctccggcggctcgagctgcgcggggtggac
gcgatccacgacgacggcacccgcggcgtgaccggggtcgacctcgacgtcgacgccggc
gacctggtgctgctgctgggccaggtcggctcgggcaagtccagcctgctcgcggcgctg
gccggcctggtcgaccacaccggcgcgatccggtggaacggccgggacgtcgaggacccc
gaggtgttcctccggcccggccaggtcgcgcacgtcgcgcaggtcccgcgggtgctctcg
ggcaccttcgccgacaacgtcgtgctcgaccacaccgtcgagcgcgggctggacgcggcc
gtcgcggacgcccggctcgggcgcgacctcgaggacgccggtgggccgcgcgccctcgtc
gggcaccgcggcgtacggctctccggcgggcaggtgcagcgcctcgcgctggcccgggcg
ctggcgaccgacgccgagctcctcctcgccgacgacgtgtccagcgccctggacgccgcc
acggagctggagctctgggacgccctgcgggcccgcggcaccacggtcgtcggagcgacc
tccaagcgggccgcgctcgcgcgcgccgaccgggtggtggtcctcgtcgacgggcgggtc
gccgcgtccgggccgtggtcggagctggcggaggcctggggccacctggccggctga
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