Nocardioides marmotae: HPC71_17385
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Entry
HPC71_17385 CDS
T09088
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPC71_17385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmar03021
]
HPC71_17385
03400 DNA repair and recombination proteins [BR:
nmar03400
]
HPC71_17385
Enzymes [BR:
nmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPC71_17385
Transcription machinery [BR:
nmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPC71_17385
DNA repair and recombination proteins [BR:
nmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPC71_17385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF4843
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QKE02648
LinkDB
All DBs
Position
complement(3676936..3677952)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLSEESVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIKIDSVL
HEFSTVEGVKEDVTEIILNLKGLVVSSEHDEPVTMYLRKSGAGDVTAADIAPPAGVEVHN
PDLKIATLSDTGKLEMELVVERGRGYVSAVQNKGADNEIGRMPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVIDVETKPSIRPRDAIASAGKTLVELFGLARELNVEAEGIDIGPSPVD
EQLAADLALPVEDLQLTVRSYNCLKREGIHTVGELISRSEQDLLDIRNFGAKSIDEVKAK
LVEMGLSLKDSAPGFDPSAALAAYGDDDDDAFVEDEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgcacagcgccccaccctgtcggaagagtccgtcgacgagttccgctcgcgg
ttcgtgatcgagccgctggagcccggcttcggctacaccctcggcaactccctgcggcga
accctcctctcctcgatccccggtgcctcggtcacgagcatcaagatcgacagcgtcctc
cacgagttctccaccgtcgagggggtcaaggaggacgtcaccgagatcatcctcaacctc
aagggcctcgtcgtctcctccgagcacgacgagccggtcaccatgtacctgcgcaagtcc
ggtgccggtgacgtcaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
cccgacctgaagatcgcgacgctctccgacaccggcaagctcgagatggagctcgtcgtc
gagcgcggccgcggctacgtctccgccgtgcagaacaagggcgccgacaacgagatcggc
cgcatgccggtcgactcgatctacagccccgtgctgaaggtgacctacaaggtcgaggcc
acccgagtcgagcagcgcaccgacttcgacaagctcgtcatcgacgtcgagaccaagccc
tcgatccgtccccgcgacgcgatcgcctcggccggcaagaccctcgtcgagctcttcggc
ctcgcccgtgagctcaacgtcgaggccgagggcatcgacatcggcccctcgccggtcgac
gagcagctcgccgccgacctcgccctcccggtcgaggacctgcagctgaccgtccggtcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcatcagccgctcggag
caggacctgctcgacatccgcaacttcggcgccaagtcgatcgacgaggtcaaggccaag
ctggtcgagatgggcctgtccctcaaggacagcgcgcccggcttcgacccgagcgccgcc
ctcgcggcgtacggcgacgacgacgacgacgcgttcgtcgaggacgagcagtactga
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