Nocardioides marmotae: HPC71_18330
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Entry
HPC71_18330 CDS
T09088
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar00521
Streptomycin biosynthesis
nmar00523
Polyketide sugar unit biosynthesis
nmar00525
Acarbose and validamycin biosynthesis
nmar00541
Biosynthesis of various nucleotide sugars
nmar01055
Biosynthesis of vancomycin group antibiotics
nmar01100
Metabolic pathways
nmar01110
Biosynthesis of secondary metabolites
nmar01250
Biosynthesis of nucleotide sugars
Module
nmar_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPC71_18330 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HPC71_18330 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HPC71_18330 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HPC71_18330 (rfbB)
00525 Acarbose and validamycin biosynthesis
HPC71_18330 (rfbB)
Enzymes [BR:
nmar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HPC71_18330 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
adh_short
Sacchrp_dh_NADP
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
QKE02805
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All DBs
Position
3859131..3860129
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AA seq
332 aa
AA seq
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MRRLLVTGGAGFIGANFVHHVLAHTDAEVTVLDKLTYAASRAALDGLPADRVRLVVGDVA
DAAVVEPLVAAHDTVVHFAAESHNDNSLDDPAPFVHTNLVGTFTLLEAVRRHDARLHHVS
TDEVYGDLDLDDPKRFTEDTPYRPSSPYSATKAGSDHLVRAWVRSFGVRATISNCSNNHG
PWQHVEKFIPRQVTNVLDGGRPKIYGDGLNVRDWIHTDDHSSAVLAILERGRIGETYLVG
ADGERNNLQVVRTILRHLGRDEDDIDFVTDRAGHDRRYAIESGKLRAELGWTPRFTDVES
GLADTIDWYVAHEAWWRPQKAATEASYAAKGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgcgacgactactcgtgaccggcggtgccgggttcatcggcgccaacttcgtccaccac
gtcctcgcccacaccgacgccgaggtgaccgtcctcgacaagctgacgtacgccgccagc
cgggccgccctcgacggcctgccggccgaccgggtccggctcgtggtcggcgacgtcgcc
gacgcggccgtggtcgagccgctcgtcgcggcgcacgacaccgtcgtccacttcgccgcc
gagtcgcacaacgacaactccctcgacgacccggcccccttcgtgcacaccaacctggtc
gggacgttcacgctcctcgaggcggtccgccgccacgacgcgcggctgcaccacgtgtcg
accgacgaggtctacggcgacctggacctcgacgacccgaagcggttcaccgaggacacc
ccgtaccgccccagcagcccctactccgccacgaaggcgggctcggaccacctggtccgc
gcgtgggtgcgcagcttcggggtccgggcgaccatctcgaactgctcgaacaaccacggg
ccctggcagcacgtcgagaagttcatcccccgccaggtcaccaacgtcctcgacggcggc
cggccgaagatctacggcgacgggctgaacgtgcgcgactggatccacaccgacgaccac
tcctcggccgtgctggcgatcctcgagcgcggccggatcggcgagacctacctcgtcggg
gccgacggcgagcggaacaacctgcaggtcgtgcgaacgatcctgcggcacctcggccgc
gacgaggacgacatcgacttcgtgaccgaccgggccggccacgaccggcggtacgcgatc
gagtccggcaagctccgggccgagctgggctggacgccccggttcaccgacgtggagtcc
ggcctggccgacacgatcgactggtacgtcgcccacgaggcctggtggcgaccgcagaag
gcggcgaccgaggcgtcgtacgccgcgaagggccagtga
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