Nesoenas mayeri (pink pigeon): 308038821
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Entry
308038821 CDS
T11968
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform 1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308038821 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmay03021
]
308038821 (CPSF3)
03019 Messenger RNA biogenesis [BR:
nmay03019
]
308038821 (CPSF3)
Transcription machinery [BR:
nmay03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
308038821 (CPSF3)
Messenger RNA biogenesis [BR:
nmay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
308038821 (CPSF3)
U7-dependent histone pre-mRNA processing factors
308038821 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
308038821
NCBI-ProteinID:
XP_080197813
LinkDB
All DBs
Position
3:complement(16693058..16713633)
Genome browser
AA seq
691 aa
AA seq
DB search
MSVKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYKWLLSDCVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRG
GRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMSVYQTYVNAMNDKI
RKQININNPFVFKHISNLKSMDHFDDIGPSIVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHVMSEPEEITTMSGQKLPMKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KPEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTQAIPYTGPFNLLYYQLQKL
TGDVEEIEIQQKPALKVFKNITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKI
QKAAVHKISKTVDMDVYRKRMEIMLQDMFGEDCVSSKDGSVLSVTVDGKTANVSLDTRTV
ECEPGSEDDESLREMVELAAQRLYDALSPVC
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaagcggaaagccgaggcgctgatcccggccgaggagagcgaccagctgctc
atccggcccctcggtgctggccaagaagtaggaaggtcatgcattattctggagtttaaa
ggaagaaaaataatgcttgattgtggaatccatcctggactggaaggaatggatgctctt
ccttacattgatttgatagatcctgctgagattgatctcctcctaattagtcatttccat
ttagatcactgtggggctttaccgtggtttttgcagaaaacaagttttaagggaaggaca
tttatgactcatgccacaaaagctatttataaatggcttctttcagactgtgtcaaagtc
agtaatatatcagcggatgacatgctatacacagagacagaccttgaagaaagcatggac
aagattgagaccatcaacttccatgaagtgaaagaggtggcaggaatcaaattctggtgt
taccacgcgggccacgttctgggagcagccatgttcatgattgaaatagctggcgtgaag
cttttatatacaggtgatttctcaagacaggaagacagacatctgatggcagctgagatt
cccaatattaaacctgatattcttataattgaatccacgtatggtactcatattcatgaa
aaaagggaagagcgagaggcacgattctgcaataccgttcatgacattgtaaatagagga
ggtagaggtcttattcctgtgtttgccctgggtcgagcgcaggagttacttttaatttta
gatgaatactggcagaatcatcctgaactccatgatatccctatatactatgcctcctct
ctggcaaagaaatgtatgtcggtttatcagacatatgtcaatgccatgaatgacaaaatc
cgcaagcaaatcaacatcaacaatccatttgttttcaagcatattagtaatctgaagagt
atggatcattttgatgatattggccccagtattgtgatggcttccccaggtatgatgcag
agtggcttgtccagagagttgtttgagagctggtgcacagataagagaaacggagtcatt
atagcagggtactgcgtggaaggaacacttgctaagcatgtcatgtctgaacctgaagag
atcacaactatgtcaggccaaaaactcccaatgaagatgtctgtggattacatttctttc
tctgctcacacagattatcaacaaactagtgaatttatccgggccctgaaacctccacat
gtgattttagttcatggtgagcagaatgaaatggccagattgaaggcagcgctgatacgg
gaatatgaggataatgacgaagttcatatagaagttcataatcctaggaatactgaagct
gtgacattaaacttcagaggagaaaaacttgccaaggtgatgggatctttagcagataag
aaaccagagcaaggacagaggatttctggaatcctagttaaaagaaattttaactatcat
atcctttctccctgtgacctctccaattatacagacttggcgatgagcactgtaacacag
acacaagccattccatatactggcccttttaatctgctttactatcagctacagaaactt
accggtgatgtagaagaaatagaaatccaacaaaaaccagccttgaaggttttcaaaaat
atcactgtgatccaggaaccaggcatggtggtccttgagtgggtggcaaatcctgctaat
gatatgtatgcagacaccgtgacaacagtgatactggaagttcagtcaaatcccaaaata
cagaaagctgcagtacataaaatttccaaaactgtagatatggatgtgtataggaagaga
atggagatcatgcttcaggacatgtttggagaagactgcgtgagttcaaaagacggctcc
gtcctgagcgtcacggtggatgggaagacggcaaacgtttccctggacacgcggacagtt
gagtgtgagccaggaagcgaagatgacgaatcccttcgtgaaatggtagagctggctgcg
cagaggctttacgatgccctcagcccagtgtgctga
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integrated database retrieval system
