Nesoenas mayeri (pink pigeon): 308040475
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Entry
308040475 CDS
T11968
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform 1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308040475 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmay03019
]
308040475 (FIP1L1)
Messenger RNA biogenesis [BR:
nmay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
308040475 (FIP1L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
308040475
NCBI-ProteinID:
XP_080200629
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Position
4:complement(49456767..49499529)
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AA seq
553 aa
AA seq
DB search
MSTGEVERLSADLGGAAGDEEEEWLYGDENETERPEEEKTSVPPPPGSEEEAAENGVVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYGYGAAPVNLNIKTGGRAYGSSGAKVK
GVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEVLPVTSTTNKITAEDNAMEVRPSAEILDGRYHLLKVQQGRTGNLEKELAVQSTKADF
TSPPALLKSGIPTNRRLAGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDNFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIESGHSSGYDGRPVRAFSYGSVTFPHLAGSAPSWSSLMDTSKQWDYYARREKDRERER
ERSRDRDRDRERDRDRDRERTRDRERDRDHSPTPSVFNSDEERHRYRDYAERGYDRHRTS
REKEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKETSGEP
APEQENTEAAPVE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggtgaggtggagcggttgtcggcggacctcggcggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaaacagagagaccagaggaagaaaaaact
agtgttccacccccacctggaagcgaagaggaagctgcagaaaatggcgttgtgaaaacg
aaggtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaaaacaggagctccacagtatggttatggagcggcacct
gtgaatctcaatattaagacaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggggtggatctagatgcaccggggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaagataaaccttggagaaagccaggagctgatctctctgactatttcaac
tatgggttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaagttttaccagttacctcaactacaaataaaattacggctgaagacaatgct
atggaagtaagaccaagtgcagagattctcgatggcagataccatcttttgaaggtacag
cagggcagaactggaaatttggagaaagagttggcagtacagtcgaccaaagctgatttc
acatctcctcctgcattactcaaatcaggaattccaacaaacaggcgattagctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgctaat
gaaaacagcaatatacaggttctttcagaacgatctaatcctgaagtagacaattttacc
aagccacctccatttttccctccaggagctccacctacccaccttccaccacctcctttt
ctcccaccccctccaactgtcagtactgctccacctctgattcccccaccaggtatacca
ataacagtgccaccaccaggctttccaccaccacctggcggtcctccaccttcccttata
cccacaatagaaagtggacattcttctgggtatgatggtcgtcctgttcgtgcattttca
tatggcagcgtcacctttccgcaccttgcaggttctgctccttcgtggtctagtcttatg
gacaccagcaaacagtgggattactatgcacgaagagagaaggacagggaacgagagaga
gagcgatcccgagatcgggatcgcgaccgggaacgggaccgagacagagatcgagaacgt
accagagacagggaaagggaccgagatcacagtccaactccaagtgtgttcaacagtgat
gaagaacgacacagatacagagactatgcagaaagaggctatgaccgccatagaacaagt
agagagaaagaagaccgacacagagataggagacacagagagaaagaagagactcgacac
aagtcatctcgaagcaacagcagacgtcgtcatgacagtgaagaaggggacagccacaga
aggcacaaacacaaaaaatccaaaagaagcaaagaaggaaaagaaaccagtggggaacct
gctcctgaacaggaaaacactgaagctgcccctgtggaatag
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