Nesoenas mayeri (pink pigeon): 308040586
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Entry
308040586 CDS
T11968
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308040586 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmay03019
]
308040586 (CPSF2)
Messenger RNA biogenesis [BR:
nmay03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
308040586 (CPSF2)
U7-dependent histone pre-mRNA processing factors
308040586 (CPSF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
308040586
NCBI-ProteinID:
XP_080200804
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Position
5:complement(17594554..17608509)
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AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLLRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAECCRAFGGKDIKVYVPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDTE
MQVDMPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVIGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYKQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgactacgctttcaggtgtgcaggaggagtctgccctctgc
tacctcttgcaagtagatgaatttcgttttcttttggactgtggctgggatgagaacttt
tctatggatattattgattctctgaggaaacatgtacaccaggttgatgctgttcttctt
tctcatcctgaccctctacaccttggagctcttccatatgcggtgggaaaaatgggcttg
aattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctctaccagtcccgccataatactgaagatttcacactctttacattggatgatgtagat
gcagcatttgataagatacaacagctgaagttttctcagattgtgaacttgaaaggcaaa
ggacatggtttgtcaatcacaccattaccagctggccacatgataggaggcacaatctgg
aagattgtcaaagatggagaggaagaaattgtttatgcagttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcagaccttcattgcttattacg
gattcatttaatgctacttacgtacaacccaggaggaaacaaagggatgaacagctactg
actaatgttttggagacattacgaggtgatggaaacgtattaatagctgtggatacagca
ggcagagttctggaacttgctcaacttcttgatcagatctggagaactaaagatgcagga
ttaggagtctactccctcgcacttttgaataatgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgctgagatgcttcgaggacaagagaaac
aatcctttccagttccgccatctctccttatgtcatagtctgtctgatctggctcgagtg
cctagtccaaaagttgttcttgccagtcaacctgacttagagtgtgggttttctagagat
ctcttcattcaatggtgccaggattccaaaaactctataatcttaacttatcgcacaaca
cctggaacattagcacgatttctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggagaag
cttaagaaagaagcagctaaaaagttagaacaatctaaagaggcagatatcgattccagt
gatgagagtgatgctgaagaggatattgatcagccaactgtacataagacgaaacatgat
ttgatgatgaaaggtgaaggtagccgcaaaggaagtttcttcaaacaggcaaaaaagtct
tatccaatgtttccagcccctgaagaaagaattaaatgggatgaatatggtgaaattatc
aaacctgaggattttctagttccagaacttcaagcaacagaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagaagagcctatggaccaggatttatcagatgttcctacc
aaatgcatttctgcaacagaatccatggaaattaaagccagagttacatacattgattat
gaaggacgctcagatggggactcaattaaaaaaattattaaccaaatgaaaccaagacaa
ctggtcattgtccacggaccacctgaggccagtcaggaccttgcagagtgttgcagagct
tttggtggaaaagatattaaagtttacgtgccaaaactgcatgaaactgtagatgcaacc
agtgaaactcacatttaccaggtcaggttgaaagattctcttgtcagctctcttcagttc
tgtaaagccaaggatgctgagttggcttggatagatggtgttctggacatgcgggtttca
aaagtggatactggagttattttggaagagggagagttgagggaagatgaggacacagag
atgcaagtggatatgccttcttcagactccagtgtcattgcacagcagaaggccatgaaa
agcctcttcggtgatgatgacaaggagatgtgtgaggagagcgagatcattcctactttg
gaacctctgccacctcatgaggttattggacatcagtctgtgtttatgaatgagccaaga
ctgtctgacttcaagcaagttctcttgcgagaaggtatacaagctgaatttgtaggagga
gtgcttgtgtgcaacaatctggtggctgttcgcaggactgaaacagggcgcattggattg
gaaggctgtctctgtcaggacttctataggataagagaccttttatacaagcaatacgct
attgtctaa
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integrated database retrieval system
