Nesoenas mayeri (pink pigeon): 308041589
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Entry
308041589 CDS
T11968
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform 1
KO
K12821
pre-mRNA-processing factor 40
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308041589 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmay03041
]
308041589 (PRPF40A)
Spliceosome [BR:
nmay03041
]
Complex A
U1 snRNP components
U1 related factors
308041589 (PRPF40A)
Complex B
308041589 (PRPF40A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
308041589
NCBI-ProteinID:
XP_080202485
LinkDB
All DBs
Position
6:complement(42952781..42975427)
Genome browser
AA seq
1024 aa
AA seq
DB search
MSGGDSAAAAATASPQPLPFSLPKPPPLMQLTPGDAVRPVASAADQSPKSTRLAGRPDWP
AGKPVSLLAPLLPPRGEPEPLMPFGPSSRQPLRGRLLGRCSGGSLLSPSMRPGGVDRGSL
MMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMM
MSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQSSVLFHPQTTHPVVCAAQQTATTNSSAT
EDHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGK
PYYYNSQTKESRWAKPKELEDLEAMIKAEENSIKPEESTPATSAPAAAAEAANATSTATA
AAETAAAGAAAATAATAAPEAESAAAASGTEAEATGTAAAEEPGQATAAPAAQEQSGEAA
AGAADDSSKQEAAADAASKKEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWE
QAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEK
MTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKN
ILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEK
QKSLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVFS
SGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTL
DAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRD
RFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGS
ESEDDDSHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDIER
EKDKKDRESEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQL
DEDQ
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggggactcggcggcggcggcggcgaccgcctccccacagccgctcccgttc
tccttgccgaagccccctcccctcatgcagctgacgccgggggacgccgtccgccccgtc
gcctccgctgcggaccaatcgccgaagagcacccgtctggcgggccgcccggattggccg
gctgggaagccagtcagcctgctggccccgctgctcccgccccgcggggagcccgagccg
ctcatgccctttggcccctcgtcgcggcagccactcagagggcggcttcttggcaggtgc
agcgggggcagcctgctcagcccctccatgcggcccggcggcgtcgaccggggctccctc
atgatgggacacccaggaatgccacattatcctcccatgggaatgcaccctatggggcag
agacccccaaatatgcctccagttccccacgggatgatgcctcagatgatgccccccatg
ggaggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatg
atgtctcacatgtcccaagctgctatgcagcctacggttccgccaggggtgaacagtatg
gatgcacaagtaggtgtaacacctcctggaactcagagctctgttttgtttcaccctcag
acaacacatcctgtggtttgtgcagcccagcaaactgccacaaccaacagttcagctacc
gaagaccactccaaacagaaatccacatggacagagcacaaatcacctgatggaagaacg
tattactataatactgaaacgaagcagtcaacgtgggagaagccagatgatctcaaaaca
ccagctgagcaattgttgtctaagtgtccctggaaagagtataaatccgattctggaaag
ccctactattataattcccaaacaaaggaatcgcgctgggcaaaacccaaagagctggag
gatctcgaagcaatgattaaagctgaagagaacagcataaagcccgaagaatcgactcca
gcaacatctgctccagctgccgcggcagaagcagcgaacgcaaccagcacagccacggct
gctgccgaaaccgccgcggccggcgctgccgccgctactgcagcaacagcggcgccagaa
gcagaatctgccgcggctgcttctgggacagaagccgaggccacgggcacggccgcggcc
gaggagccgggccaggcaacggctgcgcccgccgcgcaggagcagagcggagaagctgcc
gccggcgcggccgacgactcctccaagcaggaggctgcagcagatgctgcttcaaagaaa
gaggatgacgatgctcaaccagttaaaaaaacctacacgtggaacacaaaggaagaagcg
aagcaagcgtttaaagagctcttaaaagaaaagcgagtaccatccaatgcttcttgggag
caagctatgaaaatgatcattaatgatcctagatacagtgctttggcaaaactaagtgaa
aagaagcaagcctttaatgcttacaaagttcaaacagaaaaagaagagaaagaagaagca
agatcaaagtacaaagaagctaaagaatccttccagcgttttcttgagaaccatgaaaag
atgacatctacaacaagatacaaaaaagctgaacaaatgtttggggagatggaggtctgg
aatgcaatatctgagcgtgatcgtcttgaaatttatgaagatgtcttgttttttctgtct
aagaaagagaaggaacaagccaaacagttacgaaagcggaattgggaagctttgaagaac
atcctagataacatggctaatgtcacttactgcactacctggtcagaggctcagcagtat
ctgatggacaatcccacatttgcagaagatgaggaactgcaaaacatggataaggaggat
gcactgatctgctttgaggaacatatcagggcactggagaaagaggaggaagaggaaaaa
cagaaaagtttgcttagagaaagaaggcgacagcgtaaaaacagagaatcttttcagctg
tttctagatgaactgcacgagcacggccagttacattcgatgtcctcgtggatggagttg
taccccaccatcagctccgacatcagattcaccaacatgcttggccagcccgttttttca
tcaggatcaacagcacttgatcttttcaagttctatgttgaagacttgaaagcacgttac
catgatgagaagaagataataaaagatatcttaaaggataaagggttcgtggttgaagtg
aatacttcttttgaagatttcgttacggtcatcagttcaactaaaagagctacgacttta
gatgcaggaaatatcaagctggctttcaacagtctgctagaaaaggcagaagctcgtgag
agagagagggaaaaggaggaagctcgcaagatgaagcggaaagagtcggccttcaagagc
atgttgaagcaagcaactcctcccatcgagctggacgcggtctgggaagatatcagagat
agatttgtgaaggaaccagcatttgaagacatcacgctggagtcggaaaggaaaagaata
tttaaagatttcatgcatgtgttggagcacgagtgtcagcatcaccattcaaagaacaag
aaacattctaagaagtctaaaaaacaccacaggaagcgttctcggtctcgttcgggctca
gagtccgaggacgatgacagccattcgaagaagaaacggcagcgctcagaatccagatcg
gtttccgagcgttcttccagcgcagaatctgagagaagctacaagaagtcaaaaaaacac
aagaaaaagagcaagaagagaagacataagtcggattcaccagaatctgatatcgaacga
gaaaaagacaaaaaggacagggagagtgaaaaggatagagctagacagagatccgagtca
aaacataaatctcctactaaaaagagacctggaaaagattctgggaactgggacacgtcc
ggcagcgagctgagcgaaggggagctggaaaagcagaggaggacgcttttggaacaactg
gatgaagatcaatga
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integrated database retrieval system
