Nesoenas mayeri (pink pigeon): 308042011
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Entry
308042011 CDS
T11968
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform 1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
nmay Nesoenas mayeri (pink pigeon)
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmay03041
]
308042011 (DDX18)
03009 Ribosome biogenesis [BR:
nmay03009
]
308042011 (DDX18)
Enzymes [BR:
nmay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
308042011 (DDX18)
Spliceosome [BR:
nmay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
308042011 (DDX18)
Ribosome biogenesis [BR:
nmay03009
]
Eukaryotic type
90S particles
Helicases
308042011 (DDX18)
Pre-60S particles
308042011 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
308042011
NCBI-ProteinID:
XP_080203151
LinkDB
All DBs
Position
6:complement(35178506..35190458)
Genome browser
AA seq
645 aa
AA seq
DB search
MSVSVAASNLPMRLLRRKIHKRNLKLRQRNLKLREAEGAGEAASRGSPEEAAEEEAAPEV
EAAAAGAVAKGAEGAGPRGGEEKKRKKKKRKAAAEAGDDTKTKKAKCEEDESVEVEDEDK
QDSGEKQVEEEEGEEDEVPSLPLGVTGAFEDNSFTSLAGLVSENTLKGINDMGFTHMTEI
QHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRELAM
QTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINVIVATPGRLLDHMQNTPGFMYK
NLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPLY
VGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELL
NYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDD
PKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQL
EKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYDVNNLDLPKVSLSFGFKVPPFVDLNV
HSNHGRRLQKRGGGGGFGYQKSKNVHKAKIFKHISKKSDKRQFSR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtcggtggccgcgagcaacctgcccatgcggctgctgcgcaggaagatccac
aagcgcaacctgaagctgcggcagcgcaacctgaagctgcgggaggccgagggggcaggc
gaggcggcatcgcggggctccccggaggaggcggcggaggaggaggcggcccccgaggtg
gaggcggcggcggccggagcggtcgcgaagggtgcggagggagccgggccccgcggcggg
gaggagaagaagaggaagaagaagaagaggaaagcggcggctgaggcgggagatgataca
aaaactaaaaaagcaaaatgcgaagaagatgaatctgtggaggtagaagatgaagacaag
caggattctggagagaaacaagtggaagaggaggagggggaggaggatgaagtgcccagt
ttaccactaggtgtaacaggtgcttttgaagataattcctttacttccctggctggtctt
gtcagtgagaacacattgaaaggcataaatgacatggggtttacacacatgactgaaatt
cagcataaaagtattaagccacttctggaaggcagggatattttagcagctgcaaaaaca
ggcagtggcaaaacacttgcgtttcttattcctgcagtagagctcatctacaagttaaag
ttcatgcctagaaatggaacaggtgttattattctttctcctactcgagagcttgctatg
caaacctacggagttcttaaagaacttatgaatcatcacgttcacacctatggtctgata
atggggggcagtaacagatcagcagaagcacagaaacttggaaatggaatcaacgtcatt
gtagcaacaccaggaagacttctggatcatatgcagaacactccaggtttcatgtacaag
aacttgcagtgtttggtaattgatgaggcggatcggatcttggaggttggatttgaagaa
gaaatgaaacagatcataaaacttctaccaaagcgcagacagacgatgcttttttctgca
acacaaaccagaaaggttgaagatctggcaaagatctccctgaagaaagagccactgtat
gttggggttgatgacaacaaggagacagcaacagtagatggtcttgaacagggatatgta
gtgtgtccttctgaaaaaagattccttttgctcttcacattcctcaagaagaaccggaag
aagaaactaatggtatttttttcttcatgtatgtcagtgaagtaccactatgagttactc
aactacattgatctgcctgttttggccattcatggcaagcagaaacaaaccaaacgtact
acaacatttttccagttctgtaatgcagaatctggaatactgttgtgcaccgatgtcgct
gccagaggactggatattcctgaagttgactggattgtccagtatgaccctccagatgat
ccaaaagaatatattcatcgggttggtagaactgccagaggcataaatggtagaggacac
gctctgctcattttacgaccagaagaactgggctttcttcgttacctaaagcaagccagg
gtaccactaagtgaatttgaattttcttggtcaaaaatttcagacatccagtctcagctg
gagaaactgattgagaagaactacttccttcacaagtcagcccaggaagcctacaaagct
tacatcagagcttatgactcccattcactgaagcagatctatgatgtcaataacttggat
cttcccaaagtcagcctttcatttggctttaaagttcctccatttgtcgacctcaatgtg
cacagcaaccatggcagaagactacagaaaagaggtggaggtggaggatttggttaccag
aaatcgaagaacgtccacaaagctaaaattttcaaacacattagcaagaagtcagacaaa
cggcagttttctcgttaa
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