Nesoenas mayeri (pink pigeon): 308042470
Help
Entry
308042470 CDS
T11968
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2 isoform 1
KO
K19613
leucine-rich repeat protein SHOC2
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
308042470 (SHOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
308042470
NCBI-ProteinID:
XP_080204008
LinkDB
All DBs
Position
7:29635807..29705284
Genome browser
AA seq
582 aa
AA seq
DB search
MSTNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtactaatctaggaaaagaaaaggactgtaaagagaaggatccgaaagtcccgtcg
tcaaaagaaagggagaaagaggcaaaagcctctggaggatttgggaaagagagcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaatccagccacaggt
acccgtaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcaatgcgcttggacttgtccaagagatctatacacatgcttccatcagctatcaaa
gagctaacgcagttaacagaactttatttatacagtaacaaactgcagtccctaccggca
gaggtgggttgtcttgtgaacctgatgacactggccctgagtgaaaactcactcaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
cttagagaaatcccctcggtggtgtataggctaagctctctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagctgc
atgcagatcaccaaccttgacttgcagcacaatgagctcttggacctgccagaaaccata
ggaaatctgtccagtttaagtcgccttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcgaaatgcagtgaactcgatgaactgaacctggagaacaacaacatttct
gctttaccagagggtcttttatccagccttgtcaaactgactagtttaacactagccagg
aactgcttccagtcctatcccgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttctctagagcgaaagta
ttaagtaagctgaacatgaaggacaatcagctgacctctctccccttggacttcgggact
tggactagtatggtagaactgaacttagcgactaatcagctcacaaaaatccctgaggat
gtatctggtcttgtttcccttgaggttcttatcttgtcaaacaatctcctaaagaaactt
ccccatggaattggaaatctacggaaactccgagagttagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgaccacccttcctagaggtatcggtcaccttaccaatctgacgcaccttggg
cttggagagaatcttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccatatcgtgcc
atggtctga
DBGET
integrated database retrieval system
