Nesoenas mayeri (pink pigeon): 308043623
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Entry
308043623 CDS
T11968
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay04382
Cornified envelope formation
nmay04510
Focal adhesion
nmay04512
ECM-receptor interaction
nmay04518
Integrin signaling
nmay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308043623 (COL4A3)
04518 Integrin signaling
308043623 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308043623 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
308043623 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
308043623 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmay04147
]
308043623 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
nmay00536
]
308043623 (COL4A3)
Exosome [BR:
nmay04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
308043623 (COL4A3)
Glycosaminoglycan binding proteins [BR:
nmay00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
308043623 (COL4A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
308043623
NCBI-ProteinID:
XP_080205929
LinkDB
All DBs
Position
9:<25627753..>25686997
Genome browser
AA seq
1671 aa
AA seq
DB search
MAGVGCPGRLAPLLLLALLWPLRAPAAESCICKGKSPCLCDIMKGNKGEKGFPGVPGPPG
HRGFPGPEGPPGPQGPKGSPGLMGLAGPKGIRGLPGIPGFSGPPGLPGEPGTVGPPGHPG
VPGCNGTKGDRGFPGPPGRRGAPGVPGIAGIKGEKGCPADGYTQEYGAKGDPGLPGMPGL
QGAPGAQGYPGELGERGPPGASGMPGRAGPPGPKGLMGLKVIGTKGRKGDTGLTGPPGPP
GTVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFAGPVGDSQSEKGDRGEPGVQGKPGKE
GAPGPPGLPGPRGEQGKPGLAGRQGAKGMKGRAGPPGACGRTEYYDKVVGDKGDEGPPGP
PGPKGQRGMPGPQGPPGGAGRPGVSRPGLRGPPGFPGLKGTKGEKGQMGLCIVGPPGLPG
ITGRPGSVGLPGPPGEPGRITYRTGLPGLPGEPGCAGPPGPPGDTGMKGDEACMCTDCSY
LPGIPGLPGPPGARGLDGVAGREGTTGAKGSPGSPGAPGFPGAQGPPGFRGDQGHKGSKG
EPGYVYPEGPKGEQGDPGTGGDKGRKGSSGFLGRPGFKGFKGSKGDKGLPGSKGDRGLPG
LPGSLGLPGEMGLPGLPGYGSQGIRGFKGSKGIPGPPGLPGEAGLKGETSRIIPLPALPG
PQGPDGLPGPPGVPGAVGAQGLQGDSGHPGPTGDTGFPGLGFPGYPGPKGEKGLPGGRGP
PGCEGKIGDPGRAGNLGQPGEKGDPGTVIPGEPGRLGLPGDRGIPGSKGDTGFPGLPGLP
GRAGHDGEDGLRGDRGSPGVPGDPGFPGKPAECLIGLPGLPGGQGATGPPGGRGLQGSKG
KLGPPGLSIPGTYGKPGEPGLIGLQGNTGLPGPKGQSGRPGISGVPGSRGEPGIMGLLGF
PGPPGMIGRPGSPGIRGSPGFQGLRGRKGSLGAKGEQGDKGFPGPSETLVVIGNKGEQGL
KGVQGRMGLRGEKGDAGVQGPPGLDGSEGIPGLSGVKGFMGLPGIPGAQGFPGAPGNKGD
MGIPGPKGQKGSPGFPGPSGDPGPPGYGGFPGDKGDPGYPSAGPPGEPGPKGDLGLPGVL
GSKGEKGSQGHPGREGIPGPHGIRGETGSAGIPGKLGPPGDTGVKGRQGRPGQQGIAGPP
GAVGDPGKDGLVGERGTQGQDGMPGPPGVKGEPGAPGRGIPGLQGIPGRRGIKGDMGLPG
FPGPPGVKGHQGDQGPIGPPGLVGLPGFQGTTGMAITGQKGNRGFPGADGRTGAPGFPGP
PGLPTLSMKGSKGVRGADGIPGPTGPAGDPGPPGPKGIEGRAGYPGARGDPGFRGFPGVK
GEKGNQGPPGPQGAEGPRGPKGQQGPPGVPGRAFSIPGSKGPPGLPGIPGPPGDQGIQGI
PGIQGPKGIKGLPGHFGHPGQPGLPGPKGDRGFPGPRGQPGLIGFPGLQGLPGSPGTISA
GPTRRGFIFTRHSQSTKIPSCPQGTSQIYVGYSLLFVQGNERAHGQDLGTAGSCLQRFTT
MPFLFCSTNDVCSFASRNDYSYWLSTAAVMPVDMAPISGRALEPHISRCVVCEGAAMVIA
VHSQTAVVPACPEGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHGR
GTCNYYTNSYSFWLASLNPRRMFRKPLPQTLKAGELENIISRCQVCMKRPV
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtgggctgccccggccgcctggcgccgctgctgctgctcgccctgctctgg
ccgctccgcgccccggcggctgagagctgtatatgcaaaggtaaaagtccctgcctttgt
gatatcatgaaaggtaataagggtgaaaaaggctttcctggtgttccaggtccacctggt
cataggggcttccctggtccagaagggccgccggggccacagggaccaaagggttctcca
gggcttatgggcttagctggacccaaaggtatacgaggactcccaggaatacctggattt
tcaggtcccccaggccttccaggtgaaccaggaacagttggtcctcctgggcacccgggt
gttccaggatgcaacggcacaaagggtgatcgaggttttccaggtcctccagggagaaga
ggtgctccaggtgttccaggtattgctggcatcaaaggagagaaggggtgccctgcagat
ggatatacccaggagtatggtgcaaaaggtgatcctggactgccaggaatgcctggactt
cagggtgcaccaggtgctcaaggatatcctggggaacttggagaacgaggccctccagga
gcttcaggcatgccagggagagcaggacctcctggacctaagggtcttatgggactgaaa
gtaataggaaccaaaggaagaaagggtgacactggattaactggaccccctggaccacca
ggaactgttattgtgacactaagtggaccagacaacatgacggacttgaaaggagagaaa
ggagaaaaaggatcaagaggactcccagggccaatggggtttgcagggccggttggtgat
tctcagagtgaaaagggtgaccgaggagaacctggagtacagggtaaacctggaaaagaa
ggtgccccaggcccacccggcttaccgggaccaaggggtgaacaaggcaaaccaggactg
gctggcaggcaaggagctaaggggatgaagggaagagctggtccacccggagcttgtggt
cgaacagagtattatgataaagtggttggtgacaaaggagatgaaggaccccctggacct
ccaggaccaaaaggtcaacgtggcatgcctgggccacagggtcctcctggaggtgctggt
agaccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctgggctaaaagga
acaaaaggagagaaaggacaaatgggcttgtgtattgtaggcccaccaggactacctggt
attactggcagacctggttctgttggattaccaggtcctccgggagaaccaggtagaata
acatacagaacaggcctaccagggcttcctggagagccagggtgtgcaggacctccagga
cctccaggagacactggcatgaaaggcgatgaagcttgcatgtgtactgattgcagctat
cttccgggaatacctggtcttcctggtcctcctggggcacgtggtctggatggtgtagct
ggtagagaaggaacaacaggtgcaaaaggttctccaggttctccaggagcaccagggttt
ccaggagctcaaggacctccaggttttagaggagatcaaggacataaaggatcaaaaggt
gagccaggatatgtgtatccagaagggccaaaaggtgagcaaggagatccagggaccggg
ggagacaaaggaagaaaaggttcaagtggatttctgggaagacctggctttaaaggattc
aagggttctaaaggtgataagggactgcctggttcaaaaggagatagaggactacctggt
ttgcctggcagtcttggtcttcctggagaaatgggtcttcctggactgccaggatatgga
tcacaaggaatacgaggtttcaaaggctctaaaggaataccaggtccacccggattacct
ggagaagctggactgaaaggagagaccagtaggataattccattacctgcgttgccagga
cctcaaggaccggatggtttacctggacctccaggagtgcctggtgcggttggagcacaa
ggtctgcaaggtgattcagggcatccagggccaacaggtgacacaggctttccagggctt
gggtttcctggatacccaggtccaaaaggagagaaagggcttccaggaggcagagggcca
ccagggtgtgaaggaaagattggagatccaggccgagctggaaacctaggacaaccagga
gaaaagggtgacccaggcacagttattcctggagagccaggtagactgggtttaccagga
gatcgtggcattcctggctcaaaaggtgacactggatttccaggacttccaggcctacca
gggcgtgctggacatgatggtgaagatggtctgagaggagatcgtggctcacctggagtt
cctggagatccaggttttccagggaaacctgctgaatgtcttattggcctgccaggtttg
ccaggtggccagggagctacaggcccgccaggaggaagaggtttgcaaggttcaaaagga
aaactaggtcctcctggcttgagtatcccaggaacctacggaaagcctggggagcctgga
ttaataggtcttcagggaaacacgggattacctggtcccaagggacagtctggaaggcca
ggaatctctggtgtgccaggctcgaggggagagccaggtataatgggcctattaggattt
cctggaccccctggcatgattggaagacccggcagcccgggtatcagaggttctcctggc
ttccaaggactaaggggaagaaaaggatctcttggagcaaaaggcgaacaaggtgataaa
ggttttcctggaccatctgagaccttggttgttattgggaataaaggagaacaaggctta
aaaggagtccaaggaagaatgggtctaagaggagaaaaaggagatgctggtgtgcaaggt
cccccaggtcttgatgggtctgaaggaatacctggtctatcaggtgtcaaaggatttatg
ggtctgccagggattcctggagcacaagggttcccaggtgcaccaggaaacaaaggggac
atgggaattccgggtccaaaaggacagaaaggatctccaggctttccaggaccatcaggt
gaccccggtccaccgggctatggtggctttccaggtgacaaaggagaccctgggtaccca
tctgctgggcctccaggagaacctggtccaaagggagatctggggcttccaggagttttg
ggcagcaaaggagaaaaaggatcccaaggtcatccaggacgtgaaggaataccaggacca
catggcatcagaggggaaactggaagtgcaggaatcccagggaagcttggacctcctgga
gatactggtgttaaaggacggcagggccgcccaggacaacagggcattgcaggccctcct
ggtgctgttggagaccctggaaaagatgggcttgttggtgaaagaggtactcaaggtcag
gatggtatgcctggtcccccaggagtaaagggagaaccaggagcaccaggtcgaggaatc
cctggccttcaaggtattcctggtcgtagaggaatcaaaggggacatgggactgcctggt
tttcctgggccacctggtgtgaaaggtcatcagggtgatcaaggacccattggaccccct
ggcttagtggggctacctggatttcaaggcacaacaggcatggcaattactggccaaaaa
gggaacagaggttttcccggtgcagatggaagaacaggtgctcctggttttccagggcct
cctggtcttccgactctcagcatgaaaggaagcaaaggtgtcagaggggcagatggcata
ccagggccaacaggccccgctggcgaccctggtcctcctggtccgaaaggaatagaaggt
cgagcaggttatcctggtgctagaggggaccctggatttcgtggattcccaggtgtaaaa
ggagaaaagggtaatcaaggacctcccggaccacagggtgcagaaggcccaaggggacca
aagggccagcaaggtccacctggggtccctgggagagcattctccatcccaggaagcaag
ggtcctcctggactgccaggaataccaggaccaccaggtgatcaaggaattcaaggcatt
cctggaatacaaggacctaaaggaataaaaggtctgccaggacattttggtcatcccggt
caaccaggactgccgggtccaaaaggagacaggggatttccaggaccaagagggcaacct
ggactgattggctttccaggtctacaggggttacctggatcaccaggtactatcagtgct
ggtccaacaagaagaggttttatctttacccggcatagtcaatctacaaagattccttca
tgcccacaagggacatcgcagatctatgttggctattcactgctttttgtacaaggaaat
gaacgagcacacggacaagatcttggaacagcgggtagctgcctgcagagatttaccacc
atgccattcttattctgtagcaccaatgacgtttgtagttttgcgtctcgcaatgactat
tcatactggctgtcaactgcagcagtaatgccagtagacatggcaccgatttctggcagg
gcactagagccccatataagcaggtgtgttgtctgtgaaggagctgcaatggtaatagca
gttcacagccaaacagctgtagttcctgcgtgtccagaaggctggatatctctctggaag
ggcttttcttttgtcatgtatacaagtgccggctcagaagcttctggccaagcattggcg
tctcctggatcttgtttggaagaatttcgagccatcccattcatagagtgccatggcagg
gggacgtgcaactactacacaaattcctacagcttctggttggcgtcgttaaatccaaga
agaatgttcaggaaacctctgccacagactttgaaagcaggagaactagagaatatcatc
agccgttgtcaggtctgcatgaagagaccagtctaa
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integrated database retrieval system
