Nesoenas mayeri (pink pigeon): 308044484
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Entry
308044484 CDS
T11968
Symbol
BLM
Name
(RefSeq) recQ-like DNA helicase BLM
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay03440
Homologous recombination
nmay03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
308044484 (BLM)
03460 Fanconi anemia pathway
308044484 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmay03032
]
308044484 (BLM)
03400 DNA repair and recombination proteins [BR:
nmay03400
]
308044484 (BLM)
Enzymes [BR:
nmay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
308044484 (BLM)
DNA replication proteins [BR:
nmay03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
308044484 (BLM)
DNA repair and recombination proteins [BR:
nmay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
308044484 (BLM)
Bloom's syndrome complex (BTR)
308044484 (BLM)
FA (Fanconi anemia) pathway
308044484 (BLM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
BLM_N
RecQ_Zn_bind
Helicase_C
BDHCT_assoc
BDHCT
HRDC
RQC
ResIII
UCC1_N
NTF2_YvbJ
HMP
Motif
Other DBs
NCBI-GeneID:
308044484
NCBI-ProteinID:
XP_080207343
LinkDB
All DBs
Position
11:complement(13001706..>13018983)
Genome browser
AA seq
1336 aa
AA seq
DB search
MAAVPQNNLREQLRLHSARGGLGKAAPPRPRPTGFTFKKLSPAGRAPAAGALRDKDVNAA
LGPGAPAAAARRTQIQHFFPAGGQRGLGPGCGLRDPPGGPGGSEGLRGAPARGAGPGAAA
APAAPAGDEWDDIDDFDLSETQRFGRAPALSHPGQPRGGATPRPEQPPGASPGTGPGPRS
PPERGEASPEPEPRPLSQQSLICLDDLAPCSGDPPAGGGDWESSPAGLVLDNDGGELHPG
AEDQSGQRQQPIGGGSSRPPWGDDDGVDLELDEDDELDVVPPSPEEPPSCSPSVKSISNI
FKESPPGGRSTPSSTESQPGKVVTVQPVADSDPGAEDAGERLRGVMEEMCRLLDTVPLRE
LQALSCARDLLRLRDLRNSPRPTHLPTVQPGTVHPSNFSTKTNQTLDTSCASKLSVEELG
CPGTTALPFPKASSTDGSSWCEEPGVGTAGPASRAATAAPTTGSSAANDTDFDLDYFDID
DFDEDWENSVNVSAPQTPSAPSYQPIGEGPPTKSLSSKILSRVKGAAAVSSAAAPKSSFV
MATKNSSDQPVNNPALERFRGTKFPHSEEMMNTFHKKFGLHCFRTNQLEAINAALLGEDC
FILMPTGGGKSLCYQLPACVSAGVTIVISPLRSLIIDQVQKLKTLDIAATYLTGDRTDAD
ASKIYMQLSKKDPVIKLLYVTPEKVCASSRLMSALENLYDRRLLARFVIDEAHCVSQWGH
DFRQDYKRLNMLRKKFRSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYD
VLPKKPKKVATDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLPDS
NRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSLEGYYQESGRAGRDGE
MSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYF
GETNFNPNFCKDHPEVICDNCSRKKDYKSRNVTDEVKSIIRFVQEHCGQMGQINAKRNPG
SGRYTLNMMVDIFLGTKSAKIQSGIFGKGAAYSRHNVERLFRKLVLDKILDEDLYITAND
QAVAYVVLGEKAPAVLNGSLQVEFHETESASAIRKQRASVAKMSQREEMVKKCLGELTDT
CKMLGKVFDVHYFNIFSTSTLKKIAETLSSDAEVLLQIDGVTEDKLEKYGAEIIKVMEKY
SEWTLLEDAACQSVDTATGSTGTPGSDEDAEDVGTTSSYFCNNANQRRKRKRPPNFRDSK
RKKTSHGGSQQFHYKGGYSKYRRTRRPFGSKAPAGSGSGSAPHSVAATPGAAGRLGVLAP
PKPKARQFLQPSYSIL
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgccgcagaacaacctgcgggagcagctgcggctccactcggcccgcggc
ggcctcgggaaggcggccccgccgcggccccggcccacgggcttcacgttcaagaagctc
tccccggccgggcgcgctcccgccgccggggcgctgcgggacaaggatgtgaacgccgcc
ctgggcccgggcgcccccgccgccgcggcccggaggacgcagatccagcacttcttcccg
gcgggcggccagcggggcctcgggccgggctgcgggctgcgagaccccccgggaggcccc
ggcgggagcgaggggctgcgcggggcccccgcccggggagccgggcccggggctgcggct
gctcccgccgcccccgcgggagacgagtgggacgacatcgatgacttcgacctgtcggaa
acacaaaggttcgggcgggcgccggctctgtcccaccctgggcagccccgcggcggagcg
accccccgcccggagcagccgcccggcgcttcccccggcactggcccggggccgcgcagc
cccccggagcgcggggaggcctctccggagcccgagccccggcccctgtcccagcagtcc
ctgatctgcctggatgacctggctccctgcagcggtgacccgcccgcgggggggggcgac
tgggagagctcacccgctggcctggttctggacaatgatgggggagagctgcacccaggt
gctgaggatcagagcggccagaggcagcagccgatcggtggtgggagcagccgccccccg
tggggggatgatgacggtgttgacctggagctggatgaggacgatgagctggacgtggtg
ccgccctcccctgaggagccgccttcttgctcaccctctgtgaaaagcatcagtaatatt
ttcaaagagtctccccctgggggaagatccacacccagcagcaccgagtcccagcctggg
aaggttgtcacagtgcagcctgttgctgacagtgatcctggtgcggaggatgcaggcgag
aggctgcgcggcgtgatggaggagatgtgccggctgctggacaccgtcccgctgcgggag
ctgcaggcgctgtcctgcgccagggacctgctgcggctcagagacctcagaaactcaccc
agacccacacacctcccaactgtgcagcccgggacggttcatccaagcaacttttccacc
aaaacaaatcaaaccttggatacatcttgtgcctcaaagctgagcgtggaggaacttggc
tgccccggcacgacagccctgccctttcccaaggccagcagcacagacggcagcagctgg
tgcgaggagcccggggtgggaactgctggtcctgcgagcagagctgccactgccgccccc
accacaggcagctcagctgcaaacgacactgactttgacctcgattactttgatattgat
gattttgatgaggactgggagaactctgtgaatgtttcggcacctcaaacgccatcggca
ccatcgtaccagcccattggggaagggccacccaccaaatcgctgtcatcaaagatcctg
tccagagtcaaaggagctgctgcagtatccagcgccgctgccccgaagtccagctttgtg
atggcaacaaagaacagttcagatcagccggtgaacaaccctgcgctggaacggttcagg
ggaaccaagtttccccattctgaagaaatgatgaatacgtttcacaaaaagtttggtttg
cactgtttccggacaaatcagctggaggccatcaacgcggcgctgctgggcgaggactgt
ttcatcttgatgcccaccggcgggggaaagagcttgtgctaccagttaccagcgtgtgtc
tctgccggagtcaccatcgtcatctctccgctgaggtcgttgatcatagatcaggttcag
aagctgaagactttggatattgctgcaacatatctgactggtgacagaacagatgctgat
gcttcaaaaatatatatgcaattgtcaaaaaaagatcctgtaataaagcttctgtatgtt
acccctgagaaggtctgtgccagcagccggctcatgtcagccctggaaaacctctacgac
agacggctcctggcgcgctttgtgatcgacgaggcccactgtgtcagccagtggggtcat
gattttcggcaagactacaaacggctgaatatgctgcgcaagaagttccgctctgttccc
atgatggctctgaccgccaccgccaacccccgcgtgcagaaggacattcagaatcagctc
gagatgctgaaaccacaagtgtttacaatgagcttcaacaggcataacttgaaatacgat
gtattacccaagaagccgaagaaggtggcaacagattgcttggaatggattaaaaaatac
catccccatgactctggaataatttattgcctttcccgccatgaatgtgacacaacagcg
gccattctgcagaaggagggtctggctgctctcgcctaccacgctggcctgcccgactcc
aacagagacctggtgcagaagaagtgggttaatcaggaagggtgccaggttatatgtgca
accatcgcctttggaatgggaatcgataaacctgacgtccgctacgtgattcacgcgtct
cttcccaaatccctggaaggttactaccaggagtcgggcagggccgggcgggatggggag
atgtcccactgcctgctcttctacagctacagcgacgtcacccggctcaggaggctcatc
ctcatggagaaagatggaaacagtcacacgcgacagacccactttaacaacctgtacagt
atggttcattactgtgagaacgtagtcgactgccggagaattcagcttttggcctacttt
ggggagactaactttaatcccaacttctgtaaagatcacccagaagtaatttgtgataac
tgcagtagaaagaaggattacaaatcaagaaatgtaacagatgaagtgaagagcattata
agatttgtgcaagagcattgtggacagatgggacaaataaacgcaaagagaaatccgggt
tctgggagatacactttgaatatgatggtggacattttcttaggtacaaagagtgcgaag
attcagtctgggatatttgggaagggagctgcctactcgaggcataacgttgaaaggctg
tttagaaaactggtcttggacaagattctggatgaagatttgtatatcacagctaatgac
caagctgtggcatatgtggttctaggagagaaagctccggctgtgctcaatggctcacta
caggtggagttccatgaaacagaaagcgccagcgccatcagaaagcaaagagcttccgtg
gcaaagatgtcacagcgggaagagatggttaaaaagtgcctcggggaacttacagacaca
tgtaaaatgcttggaaaagtcttcgatgtgcattacttcaatattttcagtacttcaact
ctgaagaaaatagcagaaaccttgtcatctgatgcggaggttttactgcagattgatggt
gtcacagaagacaaactagaaaaatacggcgcagaaataattaaagtgatggagaagtac
tctgaatggaccctcctagaagatgctgcctgccaaagcgtggacacagcgacgggcagc
accggcacacctgggagcgatgaggacgcagaagatgtaggtacaacctcgagctatttt
tgcaataacgcaaaccaaagaaggaaaaggaaaaggccacccaacttcagagactcgaag
aggaagaagacaagtcacggtggcagccagcagtttcactacaaagggggttacagcaag
tacagaaggaccaggaggccgttcggctcgaaggctccagccgggtctggctccggctca
gcaccgcacagcgtcgcggccacaccaggggctgcgggcaggctgggagtcctggcaccg
ccaaaacccaaagccagacagttccttcagccttcctattcaatactgtaa
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integrated database retrieval system
