Nesoenas mayeri (pink pigeon): 308044844
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Entry
308044844 CDS
T11968
Symbol
KARS1
Name
(RefSeq) lysine--tRNA ligase isoform 1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
308044844 (KARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nmay01007
]
308044844 (KARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmay03016
]
308044844 (KARS1)
Enzymes [BR:
nmay01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
308044844 (KARS1)
Amino acid related enzymes [BR:
nmay01007
]
Aminoacyl-tRNA synthetase
Class II (A)
308044844 (KARS1)
Transfer RNA biogenesis [BR:
nmay03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
308044844 (KARS1)
Prokaryotic type
Other AARSs
308044844 (KARS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
RcgA
Motif
Other DBs
NCBI-GeneID:
308044844
NCBI-ProteinID:
XP_080207883
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All DBs
Position
12:complement(7115050..7123341)
Genome browser
AA seq
599 aa
AA seq
DB search
MLSAAARVLGGVCRAAPALRWRQALHDQRSELKRRLKAERKTAEKEAKQKEQSEKHSNKP
ALTSDSENNIGADEESLDPNQYFKIRSNAIQQLKSTNEHPYPHKFHVDLSLSDFIEKYSH
LQPGDHLTDVTVRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRLYKSEQEYFHINN
KLRRGDIIGVEGNPGKTKKGELSIIPYKITLLSPCLHMLPHLHFGLKDKETRYRQRYLDL
ILNDYVRQKFITRAKIITYIRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNL
YMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEIT
EKLLSGMVKHITGGYKITYHPDGPDGQAYEIDFTPPFRRISMVYDLEKVLGVKFPSAEYF
DTEETRRFFDDLCTEKNVECPPPRTTARLLDRLVGEFLEVTCINPTFICDHPQVMSPLAK
WHRSHQGLTERFELFVMRKEVCNAYTELNDPFRQRQLFEDQAKAKAAGDDEAMFIDENFC
TALEHGLPPTAGWGMGIDRFAMFLTDSNNIKEVLLFPAMKPEDNKKEAQPGAPPEGTSV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgccgccgcgcgggtccttggcggggtctgccgggccgcgcccgcgctgcga
tggcgccaggcgctccatgaccaacgcagtgagctgaagagacgcttaaaagctgagaga
aaaacagctgaaaaagaggcaaagcagaaagagcaaagtgaaaaacactcaaataagcct
gccctgacttctgactctgagaataacattggtgctgatgaggaaagcttggatccaaat
caatacttcaagatccgcagcaatgcaatccagcagctgaagagcaccaatgaacacccc
tatccccacaagttccatgtcgacttgtctctctcagattttatagagaagtacagtcac
ctgcagccaggagatcacctgacagatgttacagtgagagtagcaggtcgaatccacgca
aagcgtgcctctggagggaagctgattttctatgatcttcgtggtgaaggagttaaattg
caggtcatggcaaattccaggctctacaaatctgaacaagagtatttccatattaacaac
aagctgcgtcgtggggacattattggtgtagaggggaaccctggaaaaacaaagaaaggg
gaactgagtattattccttataaaataactctattgtctccatgcctgcacatgttgcct
catcttcattttggcctcaaagataaggaaactaggtatcgtcagagatacttggattta
attcttaatgattatgtgaggcagaaatttataacccgtgcaaagatcattacatatatt
cggagctttctggatgagttgggcttccttgaggttgaaactcctatgatgaatgtaatt
ccgggtggagctgtggcaaaaccttttatcacataccacaatgaactggatatgaattta
tatatgagaattgctccagagctctaccataagatgttggtggttggaggcttggacaga
gtatatgaaattgggcgtcagttccggaatgaaggaattgatttgactcacaaccctgag
ttcacaacttgtgaattctatatggcttatgcagactaccacgacttgatggaaattaca
gagaagttgctttcagggatggtgaaacatattaccggaggttacaagatcacttatcat
ccagatggtccagacggacaggcctatgagatagattttacgcctcccttccggcgaatt
agcatggtgtatgatctggaaaaggtcctgggagtgaaatttccatcagctgagtacttt
gatactgaagagactcgcagattctttgatgacctttgtacagagaaaaatgttgagtgt
ccacctcccaggacaacagccaggcttcttgacagattagttggtgaattcctggaagtc
acttgcatcaaccctacgttcatctgtgatcacccacaggtcatgagtcctctagcgaaa
tggcatcgctctcatcaaggactaacggaacgctttgaactctttgtaatgaggaaagaa
gtgtgcaatgcatacacagaacttaatgatcctttccggcagcggcagctttttgaggat
caggccaaggcaaaagcggcaggtgatgatgaagccatgtttattgatgaaaatttctgt
accgcgctggagcatggccttcctcctacagccggctggggcatgggcatcgatcgcttt
gccatgttccttacggattccaataacatcaaggaggtgctcctgttccccgccatgaag
ccggaggacaacaagaaggaggcgcagcccggcgctccgcccgaaggcacctcggtgtga
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