Nesoenas mayeri (pink pigeon): 308045317
Help
Entry
308045317 CDS
T11968
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay04382
Cornified envelope formation
nmay04510
Focal adhesion
nmay04512
ECM-receptor interaction
nmay04518
Integrin signaling
nmay04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308045317 (COL4A6)
04518 Integrin signaling
308045317 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308045317 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
308045317 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
308045317 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmay04147
]
308045317 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
nmay00536
]
308045317 (COL4A6)
Exosome [BR:
nmay04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
308045317 (COL4A6)
Glycosaminoglycan binding proteins [BR:
nmay00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
308045317 (COL4A6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
308045317
NCBI-ProteinID:
XP_080208669
LinkDB
All DBs
Position
13:<9232224..>9352919
Genome browser
AA seq
1700 aa
AA seq
DB search
MGRGCASAPGRAGALVLLLVCLGAELASGGGKKSYSGPCGGRDCSAGCKCFPEKGARGRP
GPIGLQGPIGAPGLTGPEGLPGAKGERGAVGPPGPAGQKGDKGPMGVPGFQGINGIPGHP
GQSGPRGQPGLDGCNGTTGSPGVSGSDGFPGLPGLPGRPGPKGLKGEPVFAQGSLKGMKG
ENGLPGLDGISGPKGFPGPIGAAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEKGEKGD
VGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGFPGEKGLPGLPGFGGVGEKGEKGV
PGLPGGRGLLGLDGSDGIPGSKGHPGIPGYPGLDGVEGMKGELGDIGPPGPPIVIDREGV
VISGGPGDPGNPGIPGPPGDEGIGGLPGLPGAPGFPGLERDGMGPGGAPGVPGVKGEVGE
PGRATIGLPGSLGRVGLPGLPGAPGLPGSPRPSSLPATILDGRPGVPGEPGQRGLPGALG
PKGYKGEAGDCACDGGVTRVGLKGISGPTGPSGSPGVPGSKGIGGDPGTVGAPGLRGPAA
SAGQPGLPGIKGEKGDSSYATGKGARGDPGATAPRGPSGIPGTAGRDGLPGLPGPPGPPG
DGALGFPGEKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPAGDPGMDGFPGQAGLPGPP
GITLPCVVPGAYGPPGTPGFPGLPGAKGSKGFPGIPGQPGLHGSKGHPGSPGIIGLQGEP
GFPGPRGEQGLQGLPGLDGTDGLPGKMGASGLAGPKGAPGDVFGAESGALGERGRPGLPG
DKGLTGDHGFPGPKGSDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGPFGIKGKPGPMG
SVGLAGAPGLPGAKGLAGDVGPQGPAGMKGFPGLDGTPGSPGERGFLGPPGPFGQDGHPG
FPGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGAPGTAGGIGSPGAVGLHGQKGDRGDVG
PPGLPALGLPEQAVQFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPVGSASKEK
GLHGDPGFPGPPGQPGLPGQKGAHGIVGFPGMPGERGPDGITGALGFPGPVGLPGPKGDQ
GESVGIPGIAGAKGERGDPGFPGERGREGPKGEPGYPGNTGVSGLKGSPGDLGREGPAGI
PGNAGLRGTPGPPGPPGQPGSVGFPGAHGAAGPKGFHGFPGLNGLNGLPGTKGSPGTPGL
SEAGLKGPAGLPGPKGEEGSPGLGRGAPGFPGPKGSSGDMGPPGPVGLPGLPGTPGASLP
SDIRGRPGDAGHPGTDGSSGLPGPPGPRGPPGPASDQGDTGNPGFPGVLGLRGIKGDVGP
TGPIGLPGASGLKGIRGDPGLMGMPGKDGPAGDPGHPGLKGEMGHRGLPGRQGAPGITPQ
PEEITAPAGLPGLPGIDGVPGFDGDHGFQGPAGKPGSKGLPGRSGLKGRDGLPGTPGIVG
DPGPPGAPGPQGFEGVAGKPGLLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNKLWE
GYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPI
PMMPVDSEQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGA
EGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPPSET
LKAGQLRTRVSRCQVCMKNL
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggctgcgcctctgccccggggcgcgcaggggcgctggtgctgctgctcgtc
tgcctgggcgcggagctggcgagtgggggtggaaagaagtcttacagtggaccatgtggg
ggccgcgattgcagcgctggatgcaagtgttttccagagaagggtgcacggggtcgccca
ggaccaattgggcttcaaggaccaataggtgcacctggacttactggcccagaaggtctg
ccaggagcaaaaggtgagaggggagcggtgggcccccctggaccagctggacagaaagga
gacaagggcccaatgggagttccaggatttcaaggcatcaatgggatcccaggtcaccct
ggacaatctggacctagaggtcagcctggcctcgatggctgcaatggtaccactgggagt
cctggcgtttctggatcagatgggtttcctggcctgcctgggttgcctggtcgtcctggc
ccaaaaggccttaaaggggaacctgtttttgcacaaggcagtcttaaaggaatgaaggga
gaaaatggtcttcctggattggatggaatttctggcccaaaaggtttcccaggtcccata
ggtgctgcaggccctataggattaccaggtttgcagggtccaatgggtccccctgggcca
ccaggtccaaaaggtaacatgggattaggctttcaaggagagaaaggagaaaagggtgat
gtagggctgcctggccctccaggtcccccaccatccactggaatactggaattcatggga
tttccaaaaggcaagcaaggagaaaagggtgagccaggtcctcaaggattccctggagaa
aaaggattgcctggcctgccgggctttggaggtgttggagaaaaaggagaaaaaggtgtg
cctggcttaccgggtggcaggggtcttttgggactggacggatctgatgggattcccgga
agcaagggtcatccaggtattccaggctatccaggactggatggagtcgaaggcatgaag
ggtgaattaggtgacatcggtcccccaggccctcctatcgttattgacagggaaggtgta
gtcatttcaggtggcccaggtgaccctggaaatccaggaatacctggtcctccaggagat
gaagggatcggtggtttaccaggccttccaggagctccagggtttccaggtctggagaga
gatggaatgggccctggtggggctccaggtgttcctggtgtgaagggtgaagtgggagaa
ccaggaagagcaacgattggattaccaggcagtctgggcagagttggtttaccgggtctg
ccaggagcaccaggattgcctggttcaccacgcccttcatccctcccagccacgatcctg
gatggaaggcctggggtcccaggggagcccggacaaagagggctgccaggagctttgggt
cccaaggggtacaaaggagaggcaggtgattgtgcctgtgatggaggagttacaagagtt
ggtctaaaaggcatctcaggtccaacaggtccgtcgggaagccctggtgtgccggggagt
aagggcattggtggagacccaggcactgtgggtgcaccaggactgcgaggccctgcggct
tcggctggtcagccaggtcttccaggcattaagggagaaaaaggagattcatcctacgca
acaggcaaaggtgctcgtggggaccctggtgcaacggcacccagaggaccttcgggcatc
ccaggaaccgctggcagggatggactcccaggcttgccaggcccaccaggccctccaggt
gatggcgcgctaggtttcccaggtgaaaaagggctgccaggattgcctggctccaagggc
catcgtggagaaactggttctcctggcgttggatatccaggtcctagtggagttcgtggg
ccagcaggtgacccgggaatggacgggtttccaggacaagcaggtcttccaggccctcca
ggtatcaccttgccctgtgtcgttcctggagcgtatgggcccccagggactcccggcttt
ccaggattgccaggtgccaaaggcagcaaaggctttccaggcattccaggccaacctgga
ttacatgggtcaaaaggacatccagggtctccaggaataataggcttgcaaggggaacct
ggcttccctgggcctcggggagagcaaggattacaaggacttccaggactggatggaaca
gatggtctgcctgggaaaatgggcgcctcaggcttagctggaccaaaaggagctcctgga
gatgtatttggtgctgagagtggagccctaggagagcgtggccgacctgggctcccaggt
gataaagggcttacaggtgatcatggatttccaggaccaaaagggtcagatggaagacca
ggcctcctaggtattaaaggcgaacagggtaatccaggatattcgggtgtccctggattg
cggggacctcccggtcctggaggcccttttggcatcaaggggaaaccaggacccatgggg
tcggttggccttgcaggagcaccaggacttcctggagccaaaggcttggctggggatgta
ggtccgcaaggccctgctggtatgaaaggcttcccaggtcttgatggtacaccaggatcc
cctggggaaagaggattcttagggccgcctggaccttttggtcaagatggacatccaggt
ttccctgggccaaaaggcgagaaaggctcttctggcctgcttggtttccctggcatgcca
ggcctgccgggtgtccccggagtgaatgggtttaaaggagctcctggcacagctggagga
atagggagccctggagctgtgggactccacggtcaaaaaggtgacagaggtgatgtaggt
ccgcctggtcttcctgctcttgggcttccagaacaggcagtacagttcaaaggagacaaa
ggagatcctgggttagctggacttggaggattccctggacctagaggtgataaaggaatc
ccaggcagccgtggacagcctggtctccctggtccagtgggttcagcaagcaaagagaaa
ggtcttcatggtgacccaggcttccctggtccacctggacagcctgggctgccgggacag
aagggtgcacatggtatcgtaggatttccaggaatgccaggagagaggggtccagatggt
atcactggagcacttggattcccaggacctgttggcctccctggtccaaagggtgaccag
ggagagtctgttggcattcctggtattgctggagcaaaaggagagcgaggggacccgggc
ttcccaggagagagagggagagaaggacccaagggagaaccaggctacccaggaaacact
ggggtcagtgggctcaaaggcagcccaggagatcttggccgagaaggaccagcaggaatc
cctggaaatgctgggctgagaggaacccctgggccaccaggacctccagggcagccagga
tctgtcggattccctggagctcatggagcagctggacctaaagggtttcatggatttccc
ggtttaaatggtctgaatggcttgccaggcacaaaggggtctcctggaacaccaggtctg
agtgaagctggactgaaaggccctgcaggtctcccaggtccaaagggtgaagaaggttct
ccaggcttgggtagaggagctccaggattccctggaccaaaaggctcgtcaggagacatg
ggtcctcctggtcctgtgggactgcctggcttgccaggaacacccggagcttctcttcct
tctgacatacgtggcagacccggggatgctggccatccaggaactgatgggagctcaggt
cttccaggtcctccaggaccacgagggccccctggcccagcttctgaccaaggtgacaca
ggcaatccaggtttccctggtgttcttggcttgcgaggcattaagggtgatgtgggaccc
actggtccaattggactccctggagcatctggattgaaaggtataagaggggaccctggc
cttatgggaatgccaggtaaagatgggcctgcgggggaccctggtcaccctgggctgaaa
ggtgaaatgggccatcgaggtctccctggccgacaaggggctccaggtataaccccccag
ccagaagaaatcacagcccctgcaggcttacctgggctgccaggaatagatggtgtccct
ggctttgatggagatcatggattccagggcccagctggaaaaccaggttcaaaaggtctg
ccaggaaggtctggcttgaaaggacgtgatggtttgcctggaacaccaggcatagttgga
gatccaggacctccgggtgcgccagggccacaaggatttgaaggtgttgctggaaagcca
ggcttgcttggtttgccgggaatgccgggtcggagcgtgggtgttggatacacgttggtg
aagcacagtcagtcagaccaaatcccaccgtgtcccataggaatgaataagctctgggaa
ggctacagcttattgtatgtggaggggcaggaaaagtcccacaaccaggatcttggtttt
gctggctcatgtttgcctcgcttcagcaccatgcctttcatttactgcaacatcaatgaa
gtgtgctactacgccagccgaaacgacaagtcctactggctttccaccactgcgcccatc
cccatgatgccggtggacagcgagcagatcccgcagtacatcagccgctgctcggtctgc
gaagctccttcccaggctgtggccgtgcacagccaggacatcaccatcccgcagtgtccc
ctcggctggcgcagcctctggataggatactccttccttatgcacactgcggctggtgcg
gaaggcggaggtcagtccctcgtctcacccggttcttgcctggaggatttccgtgccact
ccgttcatcgaatgcaacggcgcccgaggaacgtgccattactttgcaaacaaatacagc
ttctggctgacgacggtggagcagtcgcagcagtttgtcagcgctcctccctcggaaacc
ctgaaagcgggacagcttcgcacgagggtcagccgttgccaagtgtgcatgaagaacttg
tag
DBGET
integrated database retrieval system
