Nesoenas mayeri (pink pigeon): 308047582
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Entry
308047582 CDS
T11968
Symbol
TNC
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay04510
Focal adhesion
nmay04512
ECM-receptor interaction
nmay04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308047582 (TNC)
04518 Integrin signaling
308047582 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308047582 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
nmay00536
]
308047582 (TNC)
Glycosaminoglycan binding proteins [BR:
nmay00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
308047582 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Fn3_PBP1
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
Fn3_VIN3
EGF
DUF7949
Interfer-bind
NDNF
EGF_PEAR1L
hEGF
Fn3_R-PTP-O
SPE9_EGF_3rd
Motif
Other DBs
NCBI-GeneID:
308047582
NCBI-ProteinID:
XP_080212305
LinkDB
All DBs
Position
18:complement(<4928266..>4971559)
Genome browser
AA seq
1776 aa
AA seq
DB search
MGLPSQVLACAIFSLLCQHASGGLIKRIIRQKRETGLNVTLPEDNQPVVFNHVYNIKLPA
GSLCSVDLDSASGDADLKAEIEPIKNHEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGVGCCPNAQAAEGRLDTKPYCSGHGNYSIEICGCICEP
GWKGPNCSQPTCPSDCNDQGKCVDGVCVCFEGYTGTDCSQELCSPACSVHGRCVNGRCVC
HEGFTGEDCSEPLCPNNCHNRGRCVDNECVCDEGYTGEDCGELICPNDCFDRGRCVNGTC
FCEEGYTGEDCGELTCPNNCNGNGRCENGLCICDEGFVGDDCSEKRCPSDCHNRGRCVAG
RCICHEGYLGEDCGELRCPNDCNNRGRCVGGQCVCDEGFIGEDCGELRCPSDCNDRGRCV
NGQCVCDEGFTGESCGDLRCPNDCHGRGLCVNGQCVCDEGYTGEDCGELRCPNDCHNRGR
CVEGRCECDNGFTGEDCGELSCPNDCHQHGRCIDGRCVCHEGFTGEDCRDRTCPNDCNNV
GRCVDERCVCEEGYMGDDCSDVSPPTELTVTDVTDKTVNLEWKHENLVNEYLITYVPTSS
GGLDMQFTVPGNQTVATIHELEPGVEYFIRVFAILKNKKSIPVSARVATYLPAPEGLKFK
SVKETSVQVEWDPLNFSFDGWELIFRNMKKDDNGDITSSLKRPETSYMQPGLAPGQQYNV
SLHIVKNNTRGPGLSKVITTKLDAPSQIEAKDVTDTTALITWSKPLADIEGIELTYGPKD
VPGDRTTIDLSEDENQYSIGNLRPHTEYEVTLISRRGDMESDPMKEVFVTDLDAPRNLKR
VSQTDNSITLEWKNSHANIDNYRIKFAPISGGDHAEITVPKGNQATTRATLTGLRPGTEY
GIGVTAVRQDRESAPATINAGTDLDNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVS
PSGRKNEAEIPVDSTSFILRGLEPGTEYTVSLVAEKGRHKSKPTTVKGSTEEEPELGQFS
VSETGWDGFQLTWTAADGAYENFIIQVQESDNPEEIRNITVPGSLRVVNVTGLKANTPYN
VTLYGVTQGYRTKPLSVETMTGAHPEVGELTVSDITPESFNLSWTTTNGDFDVFTIEIID
SNRLLEPMEFNISGNSRTAHISGLSPSTDFIVYLYGISHGFRTQAISAAASTEAEPEVDN
LLVSDATPDGFRLSWTADDGVFDSFVLKIRDTKRKSDPLELIVPGHERTQDITGLKEGTE
YEIELYGVSSGRRSQPVSAVATTVVGSPKGISFSDITENSATVSWTPPRTRVESYRISYV
PVTGGTPNTVTVDGSKTRTKLVKLVPGVDYNVSIISVKGFEESEPISGTLKTALDSPSGL
VVVNITDSEALATWQPAIAAVDNYVVSYASEDEPEVTQMVSGNTVEYDLKGLRPATEYTL
SVHALKDTQKSETLSTQFTTGLDAPRDLSASEVQSEAAVITWRPPRAPVTGYLLIYESID
GRVKEVILNPETTAYSLAELSPSTQYTVKLQALSGSLRSKTIQTVFTTTGLLYPYPKDCS
QALLNGETTSGLYMIYVNGDKTQPLQVFCDMNEDGGGWIVFLRRQNGREDFYRNWKTYVA
GFGDPKDEFWIGLENLHKITSQGQYELRVDLQDRDETAYAVYDRFSVGDAKSRYRLRVDG
YSGTAGDSMMYHNGRSFSTYDKDNDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQ
GVNWFHWKGHEYSIQFAEMKLRPSSFRNLEGRRKRA
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgggactccccagccaggttttggcctgtgcaatcttctctttgttgtgccagcacgcc
agtggtggactcatcaagcgaattatccggcaaaaacgggagactgggctaaacgtgacc
ttgccagaggataatcagcctgtggtttttaaccatgtctacaacatcaagttgcctgct
ggctccctctgctctgtggacctggattcagcaagtggcgacgcggacctgaaggcagaa
atcgagcccatcaagaatcatgaggagcacacggtgaatgaggggaaccagattgtcttc
acccaccgtattaacattccccgccgggcttgtggttgtgcagctgccccagacatcaag
gatctgctgagcaggctggaggagctggaggggctggtgtcgtccctgcgggagcagtgt
gccagtggggtgggatgctgccccaatgcccaggcagcagaaggtcgcctggacacaaaa
ccctattgcagtggacacggcaactacagcattgagatctgcggctgtatttgcgagccc
ggctggaaaggccccaactgcagccagcccacctgcccgtccgactgtaacgaccaaggc
aagtgcgtggatggggtttgcgtgtgctttgaggggtacacgggcacagactgcagccaa
gagctctgctccccggcgtgcagcgtgcacgggcggtgcgtgaatgggcgctgtgtgtgc
cacgagggcttcaccggcgaggactgcagcgagcccctgtgccccaacaactgccacaac
cgcgggcgctgcgtggacaacgagtgcgtgtgcgacgagggctacaccggtgaggactgc
ggcgagctcatctgccccaacgactgcttcgaccgtgggcgctgtgtcaacgggacctgc
ttctgcgaggagggctacaccggggaggactgcggggagctcacctgccccaacaactgc
aacggcaatgggcgctgcgagaacgggctgtgcatctgcgatgagggctttgtgggggac
gactgcagtgagaagaggtgtcccagcgactgccacaaccgcgggcgctgtgtggccggg
cgctgcatctgccacgagggctacctgggcgaggactgcggggagctgcgctgccccaac
gactgcaacaaccgcgggcgctgcgtgggcgggcagtgcgtgtgcgacgaggggttcatc
ggggaggactgcggggagctgcgctgtcccagtgattgcaatgaccgcgggcgctgcgtc
aacgggcagtgcgtgtgcgatgaggggttcactggggaaagctgcggggacctgcgctgc
cccaacgattgccacggccgcgggctctgtgtcaatggacagtgcgtgtgtgacgagggg
tacacaggggaggactgcggggagctgcgctgccccaacgactgccacaaccgcgggcgc
tgcgtggagggacggtgcgagtgtgacaacggcttcacgggggaggactgcggcgagctg
tcctgccccaacgactgtcaccaacacgggcgctgcatcgacgggcgctgcgtgtgccac
gagggcttcacaggggaggactgccgtgaccggacctgccccaatgactgcaacaacgtt
ggccgctgcgttgatgaacggtgtgtctgcgaggagggttacatgggagatgactgctcc
gatgtgtctcctccaactgaactgactgtgacagacgtaacagataaaacagtaaatctg
gaatggaagcatgagaatcttgtcaacgagtacctcatcacttatgtccctaccagcagt
ggtggtctagatatgcagttcactgtgcctgggaaccaaacagttgccactatccatgag
ctggagccaggtgtagaatacttcatccgtgtctttgcaatcctgaaaaacaagaagagt
attccagtcagtgccagggtagcaacatatctgcctgctccagaaggtctgaaattcaaa
tctgttaaagaaacatctgtccaggtggagtgggatcctctgaacttttcatttgatggc
tgggagctgatcttccgcaatatgaaaaaggatgataatggagatataaccagcagcttg
aagaggccagagacatcttatatgcagccgggtttggcaccagggcaacagtataatgta
tcccttcatattgtgaaaaacaataccagaggaccaggactatctaaagtgataaccaca
aagcttgatgcccctagccagatcgaggcaaaagatgtcacggacaccacggctcttatc
acatggtccaaacccttggctgacatcgaaggcatagagctcacttacggccccaaggat
gttccaggggacaggacaaccatcgacctctctgaagatgaaaaccaatattctattgga
aacctgaggccacacacagagtatgaagtgacactcatctctcgtcgaggggacatggag
agcgaccccatgaaagaagtctttgtcacagacctggatgctccaagaaacctgaagcgg
gtgtcacagacagacaatagcattactttggagtggaagaacagccatgcgaatattgat
aactatcgaattaagtttgctcccatctctggtggagaccacgctgagatcacagtgcca
aagggcaaccaagcaacaaccagggctacgctcacaggtttgaggcctggaactgaatat
ggcattggagtgacagcagttagacaggatagggaaagcgctcctgctaccattaacgct
ggaactgatcttgataaccccaaggacttggaagtcagtgaccccactgaaaccacctta
tcccttcgctggagaagaccagtggccaagtttgaccgttatcgcctcacttatgtcagc
ccctctggaaggaagaacgaagcagagatcccggtggacagcacctcctttatcctgcga
gggctggagccaggaacagaatataccgtcagtctggtggcagagaaaggcagacacaag
agcaaacccacaactgtcaagggttcaactgaggaggaacctgagctgggacaattttca
gtgtcagagactggctgggatggtttccagctcacctggacagcagccgacggggcctac
gagaactttatcattcaggtgcaggagtctgacaatcccgaagaaatccggaatatcacg
gtcccaggcagcctgcgcgttgtgaatgttacgggcctcaaggccaacacaccttataac
gtcacactttatggtgtgacccaaggctacaggaccaaacccctttctgtcgaaaccatg
acaggagcgcacccagaagttggtgagctaactgtttccgacattactcctgaaagcttc
aacctttcttggacaaccaccaatggggacttcgacgtctttactattgaaattattgat
tctaacaggttgctggagcccatggagttcaacatctcaggcaattcaagaaccgctcat
atctcagggctttctcccagcactgattttattgtctacctctatgggatctctcatggt
ttccgcacacaggcaataagtgctgcagcttcaacagaagcagaacccgaggtcgacaac
cttctggtttcagatgctactccagatggcttccgtctgtcctggactgcagatgatggg
gttttcgacagttttgttctaaaaatcagggataccaaaaggaaatctgatccactggaa
ctaatagtaccaggccatgagcgcacccaggatataacagggctgaaagaggggactgaa
tacgaaatagagctctatggagttagcagtggacggcgttcccagcccgtcagtgcagta
gcaaccacagttgttggatctcccaagggaatttcattctctgacatcacagaaaactct
gctacggtcagctggacgccccctcgcacccgcgtggagagctaccgcatctcctacgtc
cccgtcacgggaggtactccaaatactgttacagttgatggaagcaagacaaggaccaag
ttggtgaagttagtcccgggtgtagactacaacgttagcatcatctctgtgaaaggcttt
gaagaaagtgaacccatctctggcactctgaaaacagctctggacagcccatcaggtctg
gtagtggtgaacatcacagactctgaagctctggcaacctggcagccagcgattgctgct
gtggataattacgttgtctcctacgcttccgaggatgaaccagaagttactcagatggta
tcaggaaacactgtggagtacgacctgaagggccttcgacctgcgaccgagtacacgctg
agtgtccacgcgctgaaggacacgcagaagagcgagaccctctccacccagtttactaca
ggactggatgctccaagagatttaagtgccagtgaggttcagtcagaagcagctgtgata
acgtggagacctccacgtgctcccgtcactggttatctcctcatctacgagtccattgat
ggcagagtcaaggaagtcatcctgaaccccgagacaactgcctacagcctggcagagctg
agcccatctacccagtacacggtgaaactccaggcgctgagcggatccctgaggagcaaa
acgatccagactgttttcaccacaactggtcttctctacccttaccctaaagactgctcc
caggctctcctgaacggagaaaccacctctgggctctacatgatttacgtgaatggggac
aagactcaacctctgcaagttttctgtgacatgaatgaggatggaggcggatggattgtg
ttcctgaggcgtcagaatggaagggaagatttctacaggaactggaagacttatgtggct
ggttttggagatcctaaggatgaattctggataggtctggagaacctccacaaaatcacc
tctcagggccagtacgagctgcgtgtggatctgcaggacagagacgagacagcttatgcc
gtctacgacaggttcagcgttggagatgcgaagagcagataccggctgagagtggacggg
tacagtggcacagcaggtgattccatgatgtaccataatggaaggtccttctccacctat
gacaaggacaacgattctgccatcaccaactgtgctttgtcatacaagggtgcattctgg
tacaagaattgtcaccgagtcaatctgatgggcagatacggtgacaacagccacagtcag
ggtgttaactggttccactggaagggccacgaatattccatccagtttgcggagatgaag
ctgagaccctccagcttccgaaatctggaaggaagacgaaagcgagcataa
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integrated database retrieval system
