Nesoenas mayeri (pink pigeon): 308050217
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Entry
308050217 CDS
T11968
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
nmay
Nesoenas mayeri (pink pigeon)
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmay03019
]
308050217 (TIA1)
03041 Spliceosome [BR:
nmay03041
]
308050217 (TIA1)
Messenger RNA biogenesis [BR:
nmay03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
308050217 (TIA1)
Spliceosome [BR:
nmay03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
308050217 (TIA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_ACIN1
Calcipressin
RRM_3
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
308050217
NCBI-ProteinID:
XP_080216352
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All DBs
Position
27:3221986..3232562
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AA seq
372 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS
TYEANTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMVSPVQQNQLGYPPAYGQWGQW
YGSAQLGQFVPNGWQVPAYGLYGQPWNQQGFSQTQSSAAWMGPNYGVQPPQGQNGSVVPN
QSGYRVAGFETP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaagaccctatacgtggggaacctgtcaagagatgtgaccgaa
gcactaatcctccagctgttcagccagatcggaccctgcaaaaactgcaaaatgatcatg
gatacagctggaaatgatccgtactgctttgtggagttctacgagcaccggcacgcggct
gcagccctggctgccatgaacggccggaagataatgggtaaggaggtcaaagtgaactgg
gcaacgactcccagcagccagaagaaagacaccagcaaccatttccacgtctttgtcgga
gacctcagtccagaaattacaactgaagatatcaaagcagcttttgcaccgttcggaaga
atatcagacgcgcgtgtggtgaaggacatggcgacggggaaatccaaaggctacggcttc
gtctccttcttcaacaaatgggacgcggagaacgcgatccagcagatgggcggccagtgg
ctcgggggaaggcaaatccgaacaaactgggcgacgagaaaacctccagctccaaagagc
acatatgaagcaaacaccaaacagctgtcatacgacgaggtggtcaatcagtccagcccc
agcaactgcaccgtgtactgcggaggcgtcacctcgggcctgacagagcagctcatgcgc
cagaccttttctcccttcgggcagatcatggaaatccgagtgttccccgacaaaggctac
tcctttgtacggtttaattctcacgagagcgcggcacacgccatcgtgtctgtcaacggg
acgacgatcgaaggacacgtcgtcaagtgctactggggcaaggagacgccggacatggtc
agtccggtgcagcagaaccagctgggctacccgccggcgtacgggcagtggggccagtgg
tacggtagcgcccagctgggccagttcgtccccaatggctggcaggtccccgcctacggg
ctgtacggccagccctggaaccagcagggcttcagtcagacgcagtcttcagcggcgtgg
atgggccccaactatggggtgcagccaccgcaggggcagaacgggagcgtcgtccccaac
caaagcgggtatcgcgtggccggattcgagacgccctga
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