Nesoenas mayeri (pink pigeon): 308050440 Help Entry 308050440         CDS       T11968                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism nmay  Nesoenas mayeri (pink pigeon) Pathway nmay04510   Focal adhesion nmay04512   ECM-receptor interaction nmay04518   Integrin signaling Brite KEGG Orthology (KO) [BR:nmay00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     308050440 (COL2A1)    04518 Integrin signaling     308050440 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     308050440 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nmay00536]     308050440 (COL2A1) Glycosaminoglycan binding proteins [BR:nmay00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    308050440 (COL2A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  308050440 NCBI-ProteinID:  XP_080216682 LinkDB All DBs Position 28:<770365..789248 Genome browser AA seq 1544 aa AA seqDB search MGRPLRIALAALLILGAAAQDRDLREYRDTHPAAADPPAQLRGGRERGAGDGAGHGGTVR ISHGAIAILTPPAPLPPPPPHAVSPAEAGSCLQDGQRYRDKDVWKPEPCQICVCDTGTVL CDEIVCEELRDCPSPEIPFGECCPVCPAARPPGPPGQKGEPGDIKDVVGPRGPPGTAGGS AFLRGPAGEQGQRGDRGEKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPAGLSGNFAA QMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGEPGEPGAAGPMGP RGPPGPPGKPGDDGETGKPGKAGERGAPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGE AGAPGAKGESGSPGENGSPGPMGPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGP AGAPGFPGAPGSKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGS AGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGGEQGPKGETGPAGPQGAPG PAGEEGKRGARGEPGAAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKG ATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMG FPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSG FQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPG TPGTDGPKGATGPAGPTGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDG ARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADG QAGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAG RVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDG PAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVG PPGLTGPAGEPGREGNPGADGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTG KQGDRGETGAQGPMGPAGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPG PPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPG NPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPIRYMRADEAAGGLRQHDVEVDATLKALN NQIESIRSPEGSKKNPARTCRDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFCNMETGETC VYPNPRSIPKKNWWTSKTKDKKHVWFAETINGGFHFSYGDEDLAPNTANIQMTFLRLLST EGSQNVTYHCKNSVAYMDEETGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTG KWGKTVIEYRSQKTSRLPIVDIAPMDIGGAEQEFGVDIGPVCFL NT seq 4635 nt NT seq  +upstreamnt  +downstreamnt atgggccgcccgctccgcatcgcgctcgccgcgctgctcatcctcggggcggccgcgcag gaccgggacctccgtgagtaccgggacacgcacccggccgccgcggacccgccagcgcag ctgcggggcgggcgggagcggggagcgggggacggcgcgggacacggggggacagtccgc atttcccacggcgctatcgcgatactcacccccccggcccccctgccccccccccccccc catgctgtctccccagccgaggcgggcagctgcctgcaggacgggcagcgctatcgcgac aaggacgtgtggaagccggagccgtgccagatctgcgtgtgcgacacggggaccgtcctg tgcgacgagatcgtgtgcgaggagctgcgggactgtcccagccccgagatcccgttcgga gagtgctgccccgtctgccccgccgcgcgcccccccggtccgccgggacagaagggcgaa cctggtgacattaaagatgtcgtaggaccccgagggccgccggggaccgcaggtgggagc gcgtttctccggggaccggcaggcgagcagggacagcgaggcgaccgcggcgagaagggg gagaagggtgctcctggcccccgcggaagggacggagaacccggcacccctggaaacccc ggcccccccggtccccccggcccccccggccccgccggtctgagtgggaacttcgcggcg cagatggcgggcggcttcgatgagaaggcggggggcgcgcagatgggcgtcatgcaggga cccatgggccccatgggaccccgcggcccccccggaccctccggcgctcctggtccccaa ggatttcaaggcaaccccggcgaacccggcgagcccggcgctgctggtccgatgggtccc cgagggccaccaggaccccctgggaaacccggtgacgacggcgagaccggcaaacccggc aaagccggcgagcgcggcgcccccggcccccagggtgcgcgtggcttccccgggacaccc ggtctccccggagtgaaaggtcaccggggctaccccggcttggacggcgccaagggagag gcgggcgctcctggagccaagggcgaatccggctcccccggcgagaacggctcccccggc cccatgggtccccgcgggctgcccggagagcgaggacgtcccggcccctccggcgctgcg ggtgctcgtggcaatgacggcctccccggccccgctggaccccccggacccgtcggcccg gccggagcccccggcttccccggtgcccccggctcaaagggtgaagcgggtcccaccggc gctcgcggtcccgagggtgcccagggaccccgtggtgaatccggcacccccggctctccc ggccccgccggtgcccccggtaacccagggactgacggcatccccggcgcaaaggggtcg gcgggtgcccccggaatcgctggcgctccaggcttccccggcccccgcgggccccccggc ccccagggagccaccggcccgctgggacccaagggacagacgggagaacccggcatcgcc ggcggcgaacagggaccgaagggcgagacgggacccgcgggaccccaaggtgcccccgga cccgccggcgaggaaggcaagagaggagcccgcggcgaacccggcgctgccggccccgtg gggccacccggagagaggggcgcccctggcaaccgcggcttccccggccaggacgggctg gctggacccaagggtgctccgggcgagcgcggccccgccgggctggcgggtcccaaagga gccaccggtgaccccgggcgccccggagagcccggcctgcccggagccaggggtctgacc ggccgccccggcgacgcgggtccccaaggcaaagtcggcccaaccggcgcccccggcgag gacgggcgccccggcccccccggcccgcagggcgctcgcggccagcccggcgtcatgggc ttccctggtcccaaaggcgctaacggcgagcctggaaaagccggagagaaggggctcccc ggtgcccccgggctgcggggtctccccggcaaggacggtgagacaggagctgccggcccc cccggacctgccggtcctgcaggcgagaggggagaacaaggagcccccggtccctctggc ttccaggggctgcccgggccaccaggtccccccggcgagagcggcaaacccggagatcag ggtgttcctggagaagccggtgcccctggtctcgttggccccagaggcgaacgcggcttc cccggcgaacgcggctcccccggcgcacaggggctgcaagggccccgcgggctccccggc acgccgggcaccgacggacccaagggtgcaaccggcccagccggccccaccggcgcccag ggccccccagggctgcaggggatgccgggcgagagaggagccgccggcatcgccggcccc aagggtgacaggggagacgtcggagagaagggtcccgagggagcccccggcaaggacggc gctcgtggtctcacgggtcccattggtccccccggccccgctggccccaacggcgagaag ggtgaatccggcccccctggtccatccggcgccgccggtgcccgcggtgccccgggcgag cgcggtgagcccggcgcccccggtcccgccggatttgccggccccccgggcgccgatgga caagccggtgccaaaggcgagcaaggagaacccgggcagaagggcgacgccggtgctccc ggtccccaaggcccctccggcgcaccgggcccgcagggtccaactggtgtaactggtccc aaaggagcccggggtgctcagggcccccctggagccactggattccccggcgccgccggc cgcgtggggccacccggccctaatggtaacccgggcccccccggcccccccggctccgct ggcaaagacggtcccaagggcgcccgcggcgacgccggcccccccggccgcgccggtgac cccggtctgcagggccctgccggtccccccggagagaaaggcgaacccggcgaggacggc cctgcgggcccggacggtccccccggtccccaaggcttggcaggacagcgcggcatcgtg gggctgcccggccagcgcggcgagagaggcttccccgggctgccggggccgtcgggcgaa cccggcaaacaaggagcacccggctctgccggcgaccgcggcccccccggccccgtgggg ccccccggtttgacgggtcctgctggcgaacctggacgtgagggtaaccccggcgccgac ggcccccccggcagagacggcgcagccggcgtcaagggcgatcgcggcgagacgggtccc gtgggcgcccccggcgctcctggcgcccccggcgcccccggccccgtgggtcccaccggc aaacaaggagacagaggcgagacgggcgcgcagggtcccatgggtcccgccggccccgcc ggcgctcgcggaatgccgggtccccaagggcctcgcggtgacaagggtgaggctggagag gctggagagagagggctgaagggtcaccgcggcttcaccggcctgcaggggctgcccgga ccacccggtccttctggagaccaaggtgctgctggccccgcgggtccctcgggtcccagg ggtccccccggccccgtcggcccctccggcaaagacggttccaacggcatgcccggcccc atcggcccccccgggccccgcgggcggagcggcgaacccggtcccgcgggtcctcccggt aaccccggtccccccggtcctcccggtccccccggcaccggcatcgacatgtcggctttc gcggggctgggccagcccgagaagggtccggaccccatccggtacatgcgcgcggacgag gcggccggcgggctgcgccagcacgacgtggaggtggacgccacgctcaaggccctcaac aaccagatcgagagcatccgcagccccgagggctccaagaagaacccggccaggacctgc cgcgacatcaagctctgtcaccccgactggaagagcggagactactggatcgaccccaac caaggctgcactttggacgccatcaaagtcttctgcaacatggagacgggcgagacctgc gtctaccccaaccccaggagcatccccaagaagaactggtggaccagcaagaccaaagac aagaagcacgtgtggttcgcggagaccatcaacggcgggttccactttagctacggcgat gaagacctggcgcccaacacggccaacatccagatgaccttcctgcgcctgctctccacc gagggctcccagaacgtcacctaccactgcaagaacagcgtcgcctacatggacgaggag acgggcaacctgaagaaggcaatcctcatccagggctccaacgacgtggagatccgagcc gagggcaacagcaggttcacctacagcgtcctggaggacggctgcacgaaacacaccggc aagtggggcaagacagtcatcgagtaccgctcacagaagacctcgcgcctgcccattgta gatattgcacctatggacattggtggagccgagcaggagtttggcgtggatatcggccca gtctgcttcttgtaa

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