KEGG   Nesoenas mayeri (pink pigeon): 308051947
Entry
308051947         CDS       T11968                                 
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
  KO
K12600  superkiller protein 3
Organism
nmay  Nesoenas mayeri (pink pigeon)
Pathway
nmay03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nmay00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    308051947 (SKIC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nmay03019]
    308051947 (SKIC3)
Messenger RNA biogenesis [BR:nmay03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     308051947 (SKIC3)
SSDB
Motif
Pfam: TPR_19 TPR_1 TPR_14 TPR_2 TPR_16 TPR_17 TPR_12 TPR_CcmH_CycH TPR_8 CFAP70_TPR_C TPR_11 CFAP70_mid_TPR ANAPC3 TPR_9 TTC22_N ARM_TT21_C CABIN1_N TPR_15 TPR_30 ARM_TT21 Fis1_TPR_C DUF928 TPR_Psidin_N BTAD TPR_20
Other DBs
NCBI-GeneID: 308051947
NCBI-ProteinID: XP_080218752
LinkDB
Position
Z:1106374..1155800
AA seq 1562 aa
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQTDAKGDLADVYRKLLELYESADKQKWYDVCN
KLVDLYHQEKKYLEVAEAWQKLIQMKQEEGTEKAELHQLWKKMIQLLKDSTPTQDNKTEQ
LLLTAFENAVNSADPVPSEDHRNLYKDFIQCLSKFPHESARLEKACNDMMALYPSVSYPL
EVLCLHFVQSGTLSEEALQYISKLLEMDASSGPGIIGFGVKCLQEKKYKEAIKSLTEGLQ
KTNQCPAAWHYLAEAQMKIHKHRDAVLSCNQALEALGTPEGPSLRWKNRILQLKAEALIK
IADADAAEEAIKALEQMVDASSDPVVVAIRGRAYINKGLLDQASEISQELLQSHPDLAES
HALDGFIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDVSGDKSRARGCYKKAFELDGTDEESGTAAVDLSVELG
DMDTALSILNEVTQKASPGTAKWAWLHRGLYYLRIDQPSKAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYTTALKSFRKASELNPGLVYSIYRAATVEQILGKYENAIATYKEILKRT
EDYVPALKGLGECYLMLSRSALNDYLDRKAVDYIELALEFFTRAAKHRPDVSCLWKLLGD
TCTSVHVISPTKVKVQVQGCLVGKDADKQMLEKSELLILGGRCYGRALKLMALPSIWCDL
GINYYRQAEYLTAVGTDMNEISELLEKSLQCIKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLVTRNIEQAHEAFKIAQSLDPSYLLCWVGQA
FVAEKVGSYDTMDLFRHTTELSMHTEGAKGYAYWVCSTLQDKSNRNTELYRYNIVEMNAI
PAAQVVLTKYTERNPDDASAFTMLGYLSEYLHLKRQAADAYERAAALLKDSGDTEKYYTA
MQNYGRSLCALGQCDKAIEVYTSTPLTEFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAITEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHGKGDDGIYERCLIASAVYALQGKNVAVQREISRAIHRNPDNPALWCLLSRLV
PLYASQKAKGGAMAGNIAHVLDLNHGKEALLNIAVNQLTAGCHMLEDKKNNPLKNIQKAI
HLFPDNPAAWAVLMAACHAENTVVCLNNTQPKRTDLEMTLVSTVSAKTGENNLPRNYIQT
LEDWCLCQAITSLEEAGKLSEAEALCTKGLKSYPEHPALFLLLRQVQCQQLLQSHKELPD
NVLEELRKTVMASSPSVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWHGKLSSL
LRLAMLALEVCMANVSNDHWPSLVQEATTEALKLTPCPLATLLQALLQYTRKMGARETRR
MLERVVYQPGNPETIVSVARWYLLRHLYAKDDYELIDVLIENAKANGDVRVLELNEKLSS
SA
NT seq 4689 nt   +upstreamnt  +downstreamnt
atgtcgaataaggaggtgaaggcagcattaaagagtgccagagaagcaatacgaaataaa
gaatataaagaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcctgggtatttattggcctggcagctgctgagttggagcagcctgatcaggccaaa
ggagcatataaaaaggctattgaacttgaaccaaaccagttactggcatggcaggggtta
gcaaatttatatgagaaacccaaccaaacagatgccaaaggagacttagcagatgtttac
cggaagctcttagaactctatgaaagtgctgacaagcaaaaatggtatgatgtgtgtaac
aagcttgtggacctgtatcatcaagagaagaaatatttagaggtggctgaagcatggcag
aaactgatccagatgaagcaggaggaaggtacagaaaaggcagagcttcatcagctttgg
aagaagatgatccagttgctgaaagacagtacaccgacccaggataataagaccgaacag
ttgcttttgactgcatttgaaaatgcggtgaactctgctgaccctgttcctagcgaagac
caccgaaatctttacaaggactttattcagtgcttgtcaaaatttcctcatgaatcagct
agattggaaaaggcctgtaatgatatgatggctttgtatccttctgtgagttatccttta
gaagtactttgcttgcactttgttcagtcgggtactttgtcagaagaggccctgcagtat
atttctaagcttttggagatggatgcaagtagtggtccaggcatcattggttttggtgta
aaatgcctccaagaaaaaaaatacaaggaggctattaagagtcttactgaaggtttacag
aagactaaccagtgtccagcagcatggcattatctggcagaggcacagatgaaaattcac
aaacacagggatgctgtcctgtcctgcaatcaagctcttgaggctcttggaactcctgag
ggccccagtcttcggtggaagaaccgtatccttcagttgaaagcagaggctttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagatggtggatgca
agcagtgatccagtggttgtagctatcagaggtcgggcttatataaacaaaggtttattg
gatcaagcttctgagatctcacaagagcttctgcagtcccaccctgatctcgctgagtcc
catgctctagacggtttcatccattactcccagaagaactatgaacaggcagaaagaagt
ttcttaaatgctattgaaagaaaggctgaaactgcagagtatcatcagtacctgggactc
acatactggttcatgagtgatgagacaaagaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaactggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagatgtttctggagacaaaagtagagctcgtggttgctataaaaaggcttttgag
ctggatggaactgatgaagaatctggaacagcagctgtagacttaagtgtggaacttgga
gacatggacactgctctgtccatcctgaatgaggtaactcaaaaagcaagtcctggtaca
gcaaaatgggcctggcttcatcgtggactttactacttgagaattgatcagccgtcgaaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctgggggaggcttacctgagcagaggtagctatacaacagctctaaaatccttcaga
aaagcaagtgaactgaacccgggccttgtgtacagcatttacagagctgcaacagttgag
cagattctaggcaaatacgaaaatgctatagctacatataaggaaatcttgaagaggaca
gaagactatgtccctgccctgaaaggacttggtgagtgctatctcatgctgtcaagatca
gcccttaatgactatcttgataggaaggcagtggattacatagaactggctcttgaattt
tttacaagggcagcaaaacaccgtcctgatgtatcttgcctctggaaactgctgggagat
acgtgtactagcgtgcatgttatttcaccaaccaaagtgaaagttcaagttcaaggatgt
cttgtgggtaaagatgcagacaaacagatgctggagaaaagtgagctgctcatactggga
ggaaggtgttacggcagagctttaaaattgatggctctgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagtacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctggagaagtctttacagtgtatcaaaaaagctgtgaggcttgacagc
aaaaatcatctgtattggaatgcgcttggtgtagttgcctcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgtt
gcctggaccaacttgggggttttgtatctggtaactagaaacatcgagcaagctcatgaa
gccttcaagatagcccagtctctggacccttcttacttactgtgttgggttggacaggct
tttgttgcagagaaggtaggcagctatgatactatggacctcttcaggcacacgactgaa
ctcagtatgcatactgagggggcaaaaggctacgcctactgggtatgttcaacgctgcag
gacaaaagcaacagaaacactgaactatatcgatacaacattgttgaaatgaatgctatt
ccagcagcacaagtggtcttgaccaaatatacagaaagaaatccagacgatgcatctgct
ttcacaatgcttggttatttgagtgagtatctgcatctaaaaagacaggcggcagatgcc
tatgagagggcagctgcattactgaaagactctggggatactgagaagtattatacagca
atgcaaaactatggcaggtcactgtgtgcccttggtcagtgtgataaggccattgaggtt
tacacatcaacacccctaactgagtttgatggcattgtggggatagcgttagcctacttc
aagaaagggctcttacaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaacaagataaagcacatatcctgactgccttggcaataacagaatataaacagaac
aaagttgatgctgccaagacgctgctgtttaaatgctcattaaaggaacctagtacggaa
agtctgaaggctttgtgcacactgggactcgtaaagcaggatgctacgcttgcaacagca
gccctaaaagagttactgaagcatggaaaaggggatgacggaatttacgagaggtgcctt
attgcatctgctgtttatgctttgcaaggtaaaaatgtggcagtccagagagaaatctcc
agagcaatacacaggaaccctgataatcctgccctctggtgtctcctgtctcgactagtc
cccctatatgcatcacaaaaggcaaaaggaggagctatggcaggaaacattgcgcatgta
cttgatctaaaccatggaaaggaagccctgctgaatattgcagttaatcagttgacagca
ggatgtcacatgttagaagataagaaaaacaaccctctgaaaaatattcagaaggcaatc
cacctttttccagataatcctgctgcctgggcagtgctaatggcagcctgtcatgctgaa
aacaccgttgtctgcctaaacaacactcagccaaagcgaacagatctagagatgacactt
gtatcgacagtttcagccaaaactggagaaaataaccttccacgtaattatatccagact
cttgaggactggtgtctgtgtcaggctattaccagtctagaggaggctggtaaactctcc
gaggctgaagctctttgtaccaagggtttaaaaagctaccctgaacacccagctctgttt
ttgcttctgagacaagttcagtgtcagcagctgctgcagtctcacaaagaacttccagac
aacgtcctggaagagcttcgcaagacggtcatggccagttccccttcggtggcagcctgg
caatggctggcaaaagtgtatcagtctcagaggatgatggttggagcggagatgtgctac
aggaagagtctgcagttggcgtcacagcagggcagctggcacgggaagttatccagtctg
ctcagactagctatgctagcactggaagtctgcatggctaatgtctccaatgaccactgg
ccgtccttggttcaggaggcaacaacagaagccttgaaactcactccttgtcccctggca
actctcctgcaagcactgctacagtacactcgcaaaatgggagcaagggagactcgtcga
atgttggagagagtggtgtatcaaccgggaaatccagaaaccatagtgtcagtggcacgc
tggtacctcttgcgacacctgtatgccaaagatgattatgaattaatagatgtacttata
gaaaatgccaaagctaatggggatgttagagttctggaactaaatgagaaattgtcatca
agtgcctag

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