Nesoenas mayeri (pink pigeon): 308051947
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Entry
308051947 CDS
T11968
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
308051947 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmay03019
]
308051947 (SKIC3)
Messenger RNA biogenesis [BR:
nmay03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
308051947 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_14
TPR_2
TPR_16
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_8
CFAP70_TPR_C
TPR_11
CFAP70_mid_TPR
ANAPC3
TPR_9
TTC22_N
ARM_TT21_C
CABIN1_N
TPR_15
TPR_30
ARM_TT21
Fis1_TPR_C
DUF928
TPR_Psidin_N
BTAD
TPR_20
Motif
Other DBs
NCBI-GeneID:
308051947
NCBI-ProteinID:
XP_080218752
LinkDB
All DBs
Position
Z:1106374..1155800
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQTDAKGDLADVYRKLLELYESADKQKWYDVCN
KLVDLYHQEKKYLEVAEAWQKLIQMKQEEGTEKAELHQLWKKMIQLLKDSTPTQDNKTEQ
LLLTAFENAVNSADPVPSEDHRNLYKDFIQCLSKFPHESARLEKACNDMMALYPSVSYPL
EVLCLHFVQSGTLSEEALQYISKLLEMDASSGPGIIGFGVKCLQEKKYKEAIKSLTEGLQ
KTNQCPAAWHYLAEAQMKIHKHRDAVLSCNQALEALGTPEGPSLRWKNRILQLKAEALIK
IADADAAEEAIKALEQMVDASSDPVVVAIRGRAYINKGLLDQASEISQELLQSHPDLAES
HALDGFIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDVSGDKSRARGCYKKAFELDGTDEESGTAAVDLSVELG
DMDTALSILNEVTQKASPGTAKWAWLHRGLYYLRIDQPSKAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYTTALKSFRKASELNPGLVYSIYRAATVEQILGKYENAIATYKEILKRT
EDYVPALKGLGECYLMLSRSALNDYLDRKAVDYIELALEFFTRAAKHRPDVSCLWKLLGD
TCTSVHVISPTKVKVQVQGCLVGKDADKQMLEKSELLILGGRCYGRALKLMALPSIWCDL
GINYYRQAEYLTAVGTDMNEISELLEKSLQCIKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLVTRNIEQAHEAFKIAQSLDPSYLLCWVGQA
FVAEKVGSYDTMDLFRHTTELSMHTEGAKGYAYWVCSTLQDKSNRNTELYRYNIVEMNAI
PAAQVVLTKYTERNPDDASAFTMLGYLSEYLHLKRQAADAYERAAALLKDSGDTEKYYTA
MQNYGRSLCALGQCDKAIEVYTSTPLTEFDGIVGIALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAITEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHGKGDDGIYERCLIASAVYALQGKNVAVQREISRAIHRNPDNPALWCLLSRLV
PLYASQKAKGGAMAGNIAHVLDLNHGKEALLNIAVNQLTAGCHMLEDKKNNPLKNIQKAI
HLFPDNPAAWAVLMAACHAENTVVCLNNTQPKRTDLEMTLVSTVSAKTGENNLPRNYIQT
LEDWCLCQAITSLEEAGKLSEAEALCTKGLKSYPEHPALFLLLRQVQCQQLLQSHKELPD
NVLEELRKTVMASSPSVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWHGKLSSL
LRLAMLALEVCMANVSNDHWPSLVQEATTEALKLTPCPLATLLQALLQYTRKMGARETRR
MLERVVYQPGNPETIVSVARWYLLRHLYAKDDYELIDVLIENAKANGDVRVLELNEKLSS
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataaggaggtgaaggcagcattaaagagtgccagagaagcaatacgaaataaa
gaatataaagaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcctgggtatttattggcctggcagctgctgagttggagcagcctgatcaggccaaa
ggagcatataaaaaggctattgaacttgaaccaaaccagttactggcatggcaggggtta
gcaaatttatatgagaaacccaaccaaacagatgccaaaggagacttagcagatgtttac
cggaagctcttagaactctatgaaagtgctgacaagcaaaaatggtatgatgtgtgtaac
aagcttgtggacctgtatcatcaagagaagaaatatttagaggtggctgaagcatggcag
aaactgatccagatgaagcaggaggaaggtacagaaaaggcagagcttcatcagctttgg
aagaagatgatccagttgctgaaagacagtacaccgacccaggataataagaccgaacag
ttgcttttgactgcatttgaaaatgcggtgaactctgctgaccctgttcctagcgaagac
caccgaaatctttacaaggactttattcagtgcttgtcaaaatttcctcatgaatcagct
agattggaaaaggcctgtaatgatatgatggctttgtatccttctgtgagttatccttta
gaagtactttgcttgcactttgttcagtcgggtactttgtcagaagaggccctgcagtat
atttctaagcttttggagatggatgcaagtagtggtccaggcatcattggttttggtgta
aaatgcctccaagaaaaaaaatacaaggaggctattaagagtcttactgaaggtttacag
aagactaaccagtgtccagcagcatggcattatctggcagaggcacagatgaaaattcac
aaacacagggatgctgtcctgtcctgcaatcaagctcttgaggctcttggaactcctgag
ggccccagtcttcggtggaagaaccgtatccttcagttgaaagcagaggctttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagatggtggatgca
agcagtgatccagtggttgtagctatcagaggtcgggcttatataaacaaaggtttattg
gatcaagcttctgagatctcacaagagcttctgcagtcccaccctgatctcgctgagtcc
catgctctagacggtttcatccattactcccagaagaactatgaacaggcagaaagaagt
ttcttaaatgctattgaaagaaaggctgaaactgcagagtatcatcagtacctgggactc
acatactggttcatgagtgatgagacaaagaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaactggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagatgtttctggagacaaaagtagagctcgtggttgctataaaaaggcttttgag
ctggatggaactgatgaagaatctggaacagcagctgtagacttaagtgtggaacttgga
gacatggacactgctctgtccatcctgaatgaggtaactcaaaaagcaagtcctggtaca
gcaaaatgggcctggcttcatcgtggactttactacttgagaattgatcagccgtcgaaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctgggggaggcttacctgagcagaggtagctatacaacagctctaaaatccttcaga
aaagcaagtgaactgaacccgggccttgtgtacagcatttacagagctgcaacagttgag
cagattctaggcaaatacgaaaatgctatagctacatataaggaaatcttgaagaggaca
gaagactatgtccctgccctgaaaggacttggtgagtgctatctcatgctgtcaagatca
gcccttaatgactatcttgataggaaggcagtggattacatagaactggctcttgaattt
tttacaagggcagcaaaacaccgtcctgatgtatcttgcctctggaaactgctgggagat
acgtgtactagcgtgcatgttatttcaccaaccaaagtgaaagttcaagttcaaggatgt
cttgtgggtaaagatgcagacaaacagatgctggagaaaagtgagctgctcatactggga
ggaaggtgttacggcagagctttaaaattgatggctctgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagtacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctggagaagtctttacagtgtatcaaaaaagctgtgaggcttgacagc
aaaaatcatctgtattggaatgcgcttggtgtagttgcctcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgtt
gcctggaccaacttgggggttttgtatctggtaactagaaacatcgagcaagctcatgaa
gccttcaagatagcccagtctctggacccttcttacttactgtgttgggttggacaggct
tttgttgcagagaaggtaggcagctatgatactatggacctcttcaggcacacgactgaa
ctcagtatgcatactgagggggcaaaaggctacgcctactgggtatgttcaacgctgcag
gacaaaagcaacagaaacactgaactatatcgatacaacattgttgaaatgaatgctatt
ccagcagcacaagtggtcttgaccaaatatacagaaagaaatccagacgatgcatctgct
ttcacaatgcttggttatttgagtgagtatctgcatctaaaaagacaggcggcagatgcc
tatgagagggcagctgcattactgaaagactctggggatactgagaagtattatacagca
atgcaaaactatggcaggtcactgtgtgcccttggtcagtgtgataaggccattgaggtt
tacacatcaacacccctaactgagtttgatggcattgtggggatagcgttagcctacttc
aagaaagggctcttacaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaacaagataaagcacatatcctgactgccttggcaataacagaatataaacagaac
aaagttgatgctgccaagacgctgctgtttaaatgctcattaaaggaacctagtacggaa
agtctgaaggctttgtgcacactgggactcgtaaagcaggatgctacgcttgcaacagca
gccctaaaagagttactgaagcatggaaaaggggatgacggaatttacgagaggtgcctt
attgcatctgctgtttatgctttgcaaggtaaaaatgtggcagtccagagagaaatctcc
agagcaatacacaggaaccctgataatcctgccctctggtgtctcctgtctcgactagtc
cccctatatgcatcacaaaaggcaaaaggaggagctatggcaggaaacattgcgcatgta
cttgatctaaaccatggaaaggaagccctgctgaatattgcagttaatcagttgacagca
ggatgtcacatgttagaagataagaaaaacaaccctctgaaaaatattcagaaggcaatc
cacctttttccagataatcctgctgcctgggcagtgctaatggcagcctgtcatgctgaa
aacaccgttgtctgcctaaacaacactcagccaaagcgaacagatctagagatgacactt
gtatcgacagtttcagccaaaactggagaaaataaccttccacgtaattatatccagact
cttgaggactggtgtctgtgtcaggctattaccagtctagaggaggctggtaaactctcc
gaggctgaagctctttgtaccaagggtttaaaaagctaccctgaacacccagctctgttt
ttgcttctgagacaagttcagtgtcagcagctgctgcagtctcacaaagaacttccagac
aacgtcctggaagagcttcgcaagacggtcatggccagttccccttcggtggcagcctgg
caatggctggcaaaagtgtatcagtctcagaggatgatggttggagcggagatgtgctac
aggaagagtctgcagttggcgtcacagcagggcagctggcacgggaagttatccagtctg
ctcagactagctatgctagcactggaagtctgcatggctaatgtctccaatgaccactgg
ccgtccttggttcaggaggcaacaacagaagccttgaaactcactccttgtcccctggca
actctcctgcaagcactgctacagtacactcgcaaaatgggagcaagggagactcgtcga
atgttggagagagtggtgtatcaaccgggaaatccagaaaccatagtgtcagtggcacgc
tggtacctcttgcgacacctgtatgccaaagatgattatgaattaatagatgtacttata
gaaaatgccaaagctaatggggatgttagagttctggaactaaatgagaaattgtcatca
agtgcctag
DBGET
integrated database retrieval system