Nesoenas mayeri (pink pigeon): 308052635
Help
Entry
308052635 CDS
T11968
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nmay Nesoenas mayeri (pink pigeon)
Pathway
nmay04120
Ubiquitin mediated proteolysis
nmay04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nmay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
308052635 (SYVN1)
04120 Ubiquitin mediated proteolysis
308052635 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmay04121
]
308052635 (SYVN1)
Enzymes [BR:
nmay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
308052635 (SYVN1)
Ubiquitin system [BR:
nmay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
308052635 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
U-box_ZFPL1
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
Ribosomal_60s
zf-RING_Vps41
zf-HC5HC2H
FAR1_N
zf-Nse
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
308052635
NCBI-ProteinID:
XP_080220820
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MLCTAAVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYVQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGLLDFLFVNHAYHSILTRGASVQLVFGFEYAI
LVTMVLTVFVKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDASAEELQAADNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPPPPPPEPPAPPRPPPAPQPPN
FPQGLLPPFPPGMFPFWPPVAPFPPPGTETGAPGAAPRPGDTGGAAAEPTAAPGLPLPPP
WLGTPWPPVFGLPPMPVPPAGFAGLTAEELRAMEGQERQHLEARLQCLHNIHTLLDAAML
QINQYLGVLATLGSPRPARPSDPPGAEPDPPGASAAPSAGAGEAEGAEEEEEEEQEEQEG
EEPDAAELRRRRLRKLAAPL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacggcggcggtgatggccggcagcctggcgctcaccacggccgtggtggcg
cacgcctattacctcaagcaccagttctaccccaccgtggtgtatctcaccaagtccagc
cccagcatggccgtgctgtacgtccaggccttcgtgctggttttcctgctgggcaagttc
atggggaaggtgtttttcgggcagctccgcgcggccgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcttggccttcacggtgttccgcgacgacttcagc
ccgcgcttcgtggcgctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgcgtggacttcatggagcggagccccaacatctcctggctcttccacttccgc
atcgtctcgctgatgttcctcctgggcctcctggacttcctgttcgttaaccacgcgtac
cacagcatcctaacgaggggagcgtccgtgcagctcgtcttcggcttcgagtacgccatc
ctggtcaccatggtgctcaccgtgttcgtcaagtacgtgctgcactccatcgacctgcag
aacgagaacccgtgggacagcaaggccgtctacatgctctacaccgagctcttcaccggg
ttcatcaaggtgttgctctacatggcgttcatgaccatcatgatcaaagtccacaccttc
ccgctcttcgccatccgccccatgtacttggccatgaggcagttcaagaaggccgtgacg
gacgccatcatgtcgcgccgcgccatccgcaacatgaacaccctgtacccggacgccagc
gccgaggagctgcaggcggccgacaacgtctgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcgtggttc
cagcgccagcagacgtgccccacgtgccgcatggacgtgctgcgcgcgtcgctgccgccg
ccgccgccccccgagccccccgcgcccccccggccccccccggccccgcagccccccaac
tttccgcaggggctgctgccgcccttcccccccggaatgttcccgttctggccgccagtc
gccccgttcccgccccccggcaccgaaaccggcgcccccggcgccgccccccgtcccggt
gacaccggcggcgccgccgcggaaccgacggcagcgccggggctgccgctgccccccccc
tggctggggacaccgtggccgcctgtttttgggctgccgccgatgccggtgccgcccgcc
ggcttcgcggggctgacggccgaggagctgcgcgccatggaggggcaggagcggcagcac
ctggaggcgcggctgcagtgcctgcacaacatccacacgctgctggatgcggccatgctg
cagatcaaccagtacctgggggtgctggccacgctggggtcgccccgtccggcccggccc
agcgacccccccggcgcggagcccgacccccccggagcctccgcggcccccagcgccggt
gccggtgaggccgaaggcgccgaggaggaggaggaggaagagcaggaagagcaggagggg
gaggagccggacgcggccgagctgcggcgccggcgcctccggaaactggcggctccgctc
tga
DBGET
integrated database retrieval system
