Neisseria macacae: MON40_13140
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Entry
MON40_13140 CDS
T08217
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nmb
Neisseria macacae
Pathway
nmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MON40_13140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmb03019
]
MON40_13140
03009 Ribosome biogenesis [BR:
nmb03009
]
MON40_13140
Enzymes [BR:
nmb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MON40_13140
Messenger RNA biogenesis [BR:
nmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MON40_13140
Ribosome biogenesis [BR:
nmb03009
]
Prokaryotic type
rRNA processing factors
MON40_13140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
UNV84922
LinkDB
All DBs
Position
complement(2746480..2749512)
Genome browser
AA seq
1010 aa
AA seq
DB search
MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDY
GTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL
AGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEW
DLNYLKQLWQAIEEAGKAHHEPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAE
FMSYVMPSNVGRLKLYEDHTPLFSRFQIEHQIESAFARSVSLPSGGAIVIDHTEALVSID
VNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL
RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHV
LRIIQEEAMKDNTGEVHAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHY
EINRIRIDDVEEDGEPSYKRVAEPEEDESAKPFGSERAKAARPEPAVKGVRHTQPAPTVS
EQKSGSWWDTFKAWLKRIFGGNTAAETAPVAEVAEKRTSNGNNRNGNSGNRRANNRRQNP
RRNNRHDGSKVEVREVADFKDKAADNQAAENETRNAKDNRRSRNRQNERNAASEAENLEV
QALAAATSSENESRSGEQAQGGKRRRNNNRNERNREQAEIRAEETLSETVDNAAEEGVQT
ADNDAPKGNERRQRERNNQRDRRERNNQRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVR
FAAAHVMGEPVEEEPFAVTIPAPEDSAEPLVVVVSEPVAATEEAFVFSIEGEEADSGILI
EDSTDDECSIIDSAIGSVEETSTSVFAIETEDGYQPMTAVPAEGEVEAVAEMEEELVVWK
AEREAAAAIEALAAAAAAAAAAQATESEPQTVPEAGQAEATEPEETVPAVAAMPDLGGLV
FVETNPEAVAAFAEQVQPEPESGLRRADVPKVEAEPVAAAEMVLVETRKD
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttgttcaatgcaacgcaggccgaagagttgcgcgttgccattgtcgat
gggcaaaaccttttggatttggacatcgaaacgctgggtaaagagcagcgcaaaggtaat
atttataagggtatcatcacccgcatcgagccgtcgctggaagcgtgtttcgtagattac
ggaaccgaccgccacggctttttgccgtttaaggaagtatcgcgttcgtatttccaagat
tacgaaggcggcagggcgcgcattcaagacgtgctcaaagaaggcatggaagtcatcgtc
caagtcgaaaaagacgaacgcggcaacaaaggcgcggcgctgaccaccttcatcagcctg
gccggacgctatctggtattgatgcccaacaacccgcgcggcggcggcgtatcccgccgt
atcgaaggcgaagagcgccaagaactcaaagccgctatggcagaactcgacattccgaac
ggcatgagcatcatcgcccgcaccgccggcatcggccgcagcgcggaagagttggaatgg
gatttgaactacctcaaacagctttggcaggccatcgaagaagccggtaaggcgcaccac
gaaccctacctcctcttcatggaaagctcgctgctcatccgcgccatccgcgactatttc
cgtcccgacatcggcgaaattctggtggacaatcaagaggtttatgaccaagttgccgag
tttatgagctacgtcatgccgagcaacgtaggtcgtctgaaactctatgaagaccacacg
ccgctgttctcccgcttccaaatcgaacaccaaatcgaaagcgcgtttgcccgcagcgtc
agcctgccttccggcggcgcgattgtgatcgatcacaccgaagccctcgtttccattgac
gtcaactccgcccgcgcgacacgcggcgcggacattgaagacaccgccttcaaaaccaat
atggaagccgccgaagaagtcgcacgccaaatgcgcctgcgcgacttgggcggtttggtc
gtcatcgacttcatcgacatggaaaaccccaagcaccagcgcgatgttgaaaacgtcctg
cgcgacgcgctcaaaaaagaccgcgcccgtgtgcaaatgggcaaactttcccgcttcggc
ctcttggaattgagccgccaacgcctgaaacccgccttgggcgaaagcagccatgtcgcc
tgcccgcgctgtgccggtaccggtgtgatccgcggcatcgaatcgaccgccctgcacgtt
ttgcgcatcattcaagaagaggcaatgaaagacaacaccggcgaagtgcacgcccaagtg
cccgtcgatgtcgccaccttcctgctgaacgaaaaacgcgccgagctgtttgcgatggaa
gagcgtttggatgtcaacgtcgtcctgattccgaatatccatctggaaaacccgcactac
gaaatcaaccgcatccgcatcgatgacgtagaagaagacggcgaaccgagctacaaacgc
gttgccgagccggaagaagacgaatccgccaaacctttcggcagcgaaagagccaaagcc
gcccgtcccgaacccgccgtcaaaggcgtgcgccatacccagcctgccccgaccgtatcc
gagcaaaaaagcggttcatggtgggataccttcaaagcatggctcaaacgcattttcggc
ggcaataccgcagccgaaaccgcgcctgttgccgaagtggcggaaaaacgcacttcaaac
ggcaacaaccgcaacggcaattccggcaaccgccgcgcaaacaaccgccgtcaaaacccg
cgccgcaacaataggcacgacggcagcaaggtagaagtgcgcgaagtggcggacttcaaa
gacaaagcagcagacaatcaggcggcggaaaacgaaacccgcaacgccaaagacaaccgc
cgcagccgcaaccgccaaaacgagcgcaacgccgcatcggaagccgaaaacctcgaagtc
caagcacttgccgccgcaacgtcgtctgaaaacgaatcccgttcgggcgaacaggcgcaa
ggcggcaaacgccgccgcaacaacaaccgcaacgaacgcaaccgcgaacaagcggaaatc
cgtgcggaagaaaccttgtccgaaacagtggacaacgcagcggaagagggcgtacaaacc
gccgataacgatgcaccgaaaggcaacgaacgccgccaacgcgagcgcaacaaccaacgc
gaccgccgcgaacgcaacaatcagcgcgaccgccgtcaaaacggtaaaaaacgcaatatt
ccgtctgccgccaaaatcgagcagtacctgaatattcacgataccgccgacaaagtccgc
ttcgccgccgcgcacgtcatgggcgagcctgtcgaagaagaaccgtttgccgtaaccatc
cccgctcccgaggatagtgccgagcctttggtggtcgtcgtttccgaacccgttgcggcc
actgaagaagccttcgtgttctccatcgaaggcgaagaagcggacagcggcatcctgatc
gaagacagcaccgacgacgaatgcagcatcatcgactccgccatcggcagcgtcgaagaa
acttcgacttccgtgttcgccatcgaaaccgaagacggctaccaaccaatgaccgccgtc
cctgccgaaggcgaggtcgaagccgttgccgaaatggaggaagagctggtcgtttggaaa
gccgaacgcgaagccgccgctgccatcgaagcccttgccgccgccgcagcggccgccgca
gccgcccaagcaacggaatccgagccgcaaactgtgccggaagcaggccaagcggaagcg
accgagccggaagaaactgtccctgccgttgccgcgatgcccgacttaggcggtttggtg
tttgtcgaaaccaatcccgaagccgtcgccgcctttgccgaacaggttcagcccgaaccc
gaatccggcctgcgccgcgccgacgtgccgaaagtcgaagccgaacctgtcgccgctgcc
gaaatggtcttggtggaaacgcgcaaagactaa
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