Neisseria meningitidis FAM18 (serogroup C): NMC0123
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Entry
NMC0123 CDS
T00458
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nmc
Neisseria meningitidis FAM18 (serogroup C)
Pathway
nmc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMC0123 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmc03021
]
NMC0123 (rpoB)
03400 DNA repair and recombination proteins [BR:
nmc03400
]
NMC0123 (rpoB)
Enzymes [BR:
nmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMC0123 (rpoB)
Transcription machinery [BR:
nmc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NMC0123 (rpoB)
DNA repair and recombination proteins [BR:
nmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NMC0123 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
CAM09442
UniProt:
A1KRG6
LinkDB
All DBs
Position
125013..129197
Genome browser
AA seq
1394 aa
AA seq
DB search
MYMSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENAFDKRTDDGLQAAFN
SIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRARIRLVILDKEASKPTV
KEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSA
RIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYNNEQILDIFYDKETFYLSS
NGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITAKNIRDITNAGLTRLDVEPESLL
GKALAADLIDSETGEVLASANDEITEELLAKFDINGVKEITTLYINELDQGAYISNTLRT
DETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNRLFFSEDSYDLSRVGRMKFNTRTYEQK
LSEAQQNSWYGRLLNETFAGAADKGGYVLSVEDIVASIATLVELRNGHGEVDDIDHLGNR
RVRSVGELTENQFRSGLARVERAVKERLNQAESENLMPHDLINAKPVSAAIKEFFGSSQL
SQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGL
INSLSVYARTNDYGFLETPYRRVIDGKVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIG
DLVTCREKGETIMATPDRVQYMDVATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVP
CLRPEKPMVGTGIERSVAVDSATAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIY
NLVKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYN
YEDSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIV
YIGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDV
QVFTREGIQRDKRAQSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKL
AKGSEITTEYLAGLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLT
QGDELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIV
LNPLGVPSRMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKED
LDSLTDEEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKT
QITLYDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQ
RFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
EIRSLGLDIDLERY
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
gtgtatatgagctattcgtttaccgagaaaaaacgtatccgtaagagttttgcaaagcgg
gaaaatgttttggaagttcctttcttgctagcaacccaaattgattcttatgcgaagttt
ttgcagctggaaaatgcttttgacaaacgtaccgatgacggtctgcaggcagcatttaat
tctattttcccgattgtgagccataacggttatgcgcgattggagtttgtgcattacaca
ttgggcgagcctttgttcgatattcccgaatgtcagttgcgcggaatcacttatgcagcc
cccttgcgcgcgcgtatccgtttggtgattttggataaggaagcatctaaaccgacggta
aaagaagttcgtgaaaacgaagtgtatatgggcgaaattccgttgatgaccccgagcggt
tcttttgtgattaacggcacagagcgtgtgattgtctcccagttgcaccgttcgcccggc
gtattcttcgagcatgacaaaggtaagacgcactcttccggcaaattgttattctccgcc
cgcatcattccctaccgtggttcatggttggattttgaatttgatccgaaagatttgctg
tatttccgtatcgaccgccgccgtaaaatgccggtaacgattttgttgaaggctttgggc
tacaacaatgagcaaatcttggatattttctacgacaaagaaacgttctatttgtcttca
aacggtgttcaaaccgatttggtcgcaggccgtctgaaaggcgaaactgccaaggtcgat
atcttggataaagaaggcaatgtattggttgccaaaggtaagcgtattactgcgaaaaat
atccgtgatattaccaatgcaggcctgacccgtttggatgtagaaccggaaagcctgctg
ggcaaagcattggctgccgatctgattgattcggaaaccggcgaggtattggcttctgcc
aatgatgaaattacagaagagttgttggccaaatttgatatcaacggcgtaaaagaaatt
acgaccctttacatcaatgagttggatcagggtgcttatatctccaataccttgcgtacg
gatgagactgccggccggcaggcggctcgtgttgcgatttaccgtatgatgcgtccgggc
gaaccgcccactgaagaggcggtcgagcaattgtttaaccgcttgttcttcagtgaagac
agctacgatttgtcccgcgtaggccgtatgaaatttaatacgcgcacatacgaacaaaaa
ctgtccgaagcccaacaaaactcttggtacggccgcctgctgaacgaaacgtttgccggt
gctgccgacaaaggcggttatgtcctgagcgtcgaagatattgtcgcctcgattgcgact
ttggtcgagttgcgtaacggccatggcgaagtggacgatatcgatcacttgggcaaccgc
cgagtacgttcggtaggcgagctgactgaaaaccaattccgcagcggtttggcccgtgtg
gaacgtgctgtaaaagaacgtttgaatcaggcggaatcagaaaacttgatgccgcacgat
ttgattaatgcaaaacctgtttctgccgctattaaagaattcttcggctccagccaattg
agtcagtttatggatcagaccaaccccttgtctgaagtaacccataaacgccgcgtatct
gcattgggtccgggcggtttgacccgcgaacgtgccggcttcgaggtacgggacgtgcat
ccgacccactacggccgcgtatgtccgattgaaacgcctgaaggtccgaacatcggtttg
atcaactcattgtccgtttatgcgcgcaccaatgattacggtttcttggaaacgccttac
cgccgcgttatcgacggcaaagtaaccgaggaaatcgattacttgtctgccatcgaagaa
ggccgctatgtgattgcacaggcgaatgccgatttggattcagatggcaatctgattggc
gatttggttacctgtcgtgaaaaaggcgaaaccattatggcaacgcccgaccgcgtccaa
tatatggacgtggcaaccggccaggtggtatccgttgcggcatccctgattccgttcttg
gaacatgatgacgcgaaccgcgcattgatgggtgccaacatgcaacgtcaggcagtgcct
tgcttgcgtcctgaaaaaccgatggtcggtaccggtatcgagcgttccgttgccgttgac
tctgctactgcaatcgttgcccgccgaggcggcgtggtcgagtatgtcgatgccaaccgt
gttgtgattcgtgtccatgacgacgaagcgactgccggcgaagtgggtgtcgatatttac
aacttggttaaatttacccgttccaaccagtctaccaatatcaatcagcgtcctgccgtc
aaagccggcgatgttttgcaacgcggcgatttggtggccgatggcgcgtccaccgatttg
ggcgaattggctttgggtcaaaatatgaccatcgccttcatgccgtggaacggttacaac
tacgaagactcgattctgatttccgaaaaagtggctgcggatgatcgttacacttcgatt
cacattgaggaattgaatgtcgttgcccgcgataccaagctgggtgcggaagacattacc
cgcgatattccgaacttgtccgagcgtatgcaaaaccgcttggacgaatccggtatcgtt
tacatcggtgcagaagtagaagccggcgatgtgttggtaggcaaagtaacgcctaaaggc
gaaacccaactgacgccggaagaaaaactgttgcgcgccatcttcggcgaaaaagcgtct
gacgtaaaagatacttcactgcgtatgcctaccggtatgagcggtacggttatcgacgtt
caagtcttcactcgtgaaggtattcaacgcgacaaacgcgcccaatccattatcgattcc
gagttgaaacgctaccgtttggatttgaacgaccaattgcgtattttcgacaacgacgca
ttcgaccgtatcgaacgtatgattgtgggtcaaaaagccaatggtggtccgatgaagctg
gctaaaggcagcgaaattactaccgaatatttggcgggtctgccgagcaggcacgattgg
ttcgatatccgtctgaccgatgaagatttggccaagcagttggaactgattaaagtgagc
ctgcaacaaaaacgcgaagaagcggacgagttatacgaaatcaagaagaaaaaactgacc
caaggcgacgaattgcaacccggcgtacaaaaaatggtgaaagtttttatcgccatcaaa
cgccgtctgcaagccggcgacaaaatggcgggccgccacggtaacaaaggcgtggtatcg
cgcattctgccagtggaagacatgccttacatggcggacggccgtccggtagacatcgta
ctgaacccattgggcgtaccttcccgtatgaacatcggtcagattttggaagttcacttg
ggttgggcagcaaaaggtatcggcgagcgtatcgaccgtatgctgaaagagcaacgcaaa
gcaggcgagttgcgcgagttcttgaacagactctacaacggcagcggtaagaaagaagat
ttggacagcctgacagatgaagaaatcatcgaattggcttccaacctgcgtaaaggtgca
tctttcgcttctcctgtattcgacggtgcgaaagagtctgaaatccgcgaaatgttgaac
ttggcttacccaagcgaagatcctgaggttgagaaactgggcttcaacgacagtaaaact
caaatcacgctgtatgacggccgttcaggcgaagcatttgatcgcaaggttacagtcggt
gtgatgcactatctgaaactgcaccacttggttgacgaaaaaatgcacgcccgttctacc
ggtccatacagtctggttacccaacagcctttgggcggtaaagctcagttcggtggccaa
cgtttcggtgagatggaggtttgggcattggaagcatacggtgcggcatacacgctgcaa
gagatgctgactgtgaagtctgatgacgtgaacggccgtaccaaaatgtacgagaacatc
gtcaaaggcgaacacaaaatcgatgccggtatgcccgagtccttcaacgtattggttaaa
gagattcgttcactgggcttggatatcgatttggaacgctactaa
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