Neisseria meningitidis FAM18 (serogroup C): NMC0187
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Entry
NMC0187 CDS
T00458
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nmc
Neisseria meningitidis FAM18 (serogroup C)
Pathway
nmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMC0187 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmc03019
]
NMC0187 (rne)
03009 Ribosome biogenesis [BR:
nmc03009
]
NMC0187 (rne)
Enzymes [BR:
nmc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NMC0187 (rne)
Messenger RNA biogenesis [BR:
nmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMC0187 (rne)
Ribosome biogenesis [BR:
nmc03009
]
Prokaryotic type
rRNA processing factors
NMC0187 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
CAM09506
UniProt:
A1KRM8
LinkDB
All DBs
Position
complement(185095..187854)
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AA seq
919 aa
AA seq
DB search
MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDY
GTDRHGFLPFKEVSRSYFRDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL
AGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEW
DLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVHDQVAE
FMSYVMPGNVGRLKLYQDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSID
VNSARATRGSDIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL
RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHV
LRMVQEEAMKDNTGEVHAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHY
EINRIRIDDVEEDGEPSYKRVAEPEEDESAKPFGSEKAKASRPEPAVKGVRHTQPAPTVA
PEKKASWWDSFKAWLKRIFGGSETQAAPAAETSEKRSTANRSGSRANNRRQNPRRSKREG
SKVEVREVAGKTAGQEARADKAETRNNGNRRRNERGDRAAGRADEAEIQDRNIQPAATVA
DAAPSETEVQTGKRRRNGSRSERGQTAPETATVAETTVQTAENTPSEPHTAEDKGSKPKS
ERNRRERDSRDAKERRERNNQRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVF
GETDANAPITVSIADPVAERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAE
AQEMPSETATFTAAAEQARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKP
SEVATVPAEEMIQVETRQG
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttattcaacgcaacgcaggccgaagagctgcgcgttgccatcgtcgat
ggccaaaaccttttggacttggacatcgaaacgctgggcaaagaacagcgtaaaggcaat
atctacaaaggtatcattacccgcatcgagccgtcgctggaagcatgtttcgtcgattac
ggaaccgaccgccacggctttttgccgtttaaggaagtatcgcgttcatatttccgcgac
tacgaaggcggcagggcgcgtattcaggacgtgctcaaagagggcatggaagtcattgtc
caagtcgaaaaagacgaacgcggcaacaaaggcgcggcgctgaccactttcatcagcctg
gccggccgctatttggtattgatgccgaacaacccgcgcggcggcggcgtatcccgccgt
atcgaaggcgaagagcgtcaagagttgaaagccgccatggccgaactcgacattccaaac
ggcatgagcatcattgcccgtactgccggcatcggccgcagtgcggaagagttggaatgg
gacttgaactacctcaaacaactctggcaagccattgaagaagcaggcaaagcacaccat
gacccttacctgctctttatggaaagctcactgctgatccgtgcgattcgagactatttc
cgtcccgatatcggtgagattttggtggacaatcaagaagttcacgaccaagttgccgag
ttcatgagctacgtcatgccgggcaatgtaggccgtctgaaactctatcaagaccacacg
ccgctgttctcccgtttccaaatcgaacaccaaattgaaagcgcgttctcacgcagcgtc
agtctgccttccggcggcgcgattgtgatcgaccacaccgaagccctggtttccatcgac
gtcaactctgcccgcgccacacgcggctctgacattgaagacaccgcgttcaaaaccaat
atggaagccgccgaagaggttgcccgtcaaatgcgcctgcgcgacttgggtggtttggtc
gtcatcgacttcatcgacatggaaaatccgaaacatcagcgcgatgttgaaaacgtcctg
cgcgatgcgctcaaaaaagaccgcgcccgcgtgcaaatgggcaaactttcgcgtttcggc
cttttggaattgagccgccaacgtctgaaaccggctttgggcgaaagcagccacgtcgcc
tgtccgcgctgcgccggcacaggcgtcatccgcggcatcgaatccaccgccctgcacgtt
ttgcgtatggttcaggaagaagcgatgaaggacaacaccggcgaagtgcatgcacaagtg
cccgtcgatgtcgccaccttcctgctgaacgaaaaacgcgccgagctgtttgcgatggaa
gagcgtttggatgtcaacgtcgtcctgattccaaacatccacttggaaaatccgcactac
gaaatcaaccgcatccgcattgatgacgtagaagaagacggcgaaccgagctacaaacgc
gttgccgagccggaagaagacgaatccgccaaacctttcggcagcgaaaaagccaaagct
tcccgtcctgagccagctgtcaaaggcgtacgccatacccagcctgcaccgactgtcgcc
cctgagaaaaaagcctcttggtgggacagcttcaaagcttggttgaaacgcattttcggc
ggcagcgaaacccaagccgcgcccgctgccgaaacctccgaaaaacgcagcacggcaaac
cgcagcggcagccgcgccaacaaccgccgccaaaacccgcgccgcagcaaacgcgaaggc
agcaaagtagaagtccgcgaagtggcaggcaaaactgccggacaggaagcgcgcgccgac
aaagccgaaacgcgcaacaacggcaaccgccgccgcaacgaacgcggcgaccgtgccgcc
ggacgcgccgacgaagcggaaatccaagaccgcaacatacagcctgccgcaaccgttgca
gatgccgcaccgtccgaaaccgaagtgcaaaccggaaaacgccgccgcaacggcagccgc
agcgaacgcggccaaaccgcgccggaaaccgccaccgttgccgaaacaaccgttcagaca
gcggaaaacacgccgtccgaaccgcataccgcagaagacaaaggcagcaagcccaaatcc
gaacgcaaccgccgcgaacgcgacagccgagatgccaaagaacgccgcgagcgcaacaat
cagcgcgaccgccgtcaaaacggcaaaaaacgcaatattccgtctgccgccaaaatcgag
cagtacctgaatattcacgacaccgccgacaaagtccgttccgccgccgcgcacgttttc
ggcgaaaccgacgcaaacgcgccgattaccgtcagcattgccgatccggttgcagaaagg
gatcttccgacagcatctcccgccgtttcaaacggcgacgcaccggtttatgatgcggcg
gaaaaaatccgccgtgccaccgccgccatcctgcccgaaggcgcgacaccgaaagccgaa
gcacaggaaatgccgtctgaaaccgcaacctttacggctgcggcggaacaggcacgggaa
accgcacaaaccggcggactcgtcctgatcgaaaccgaccctgccgcattgaaggcatgg
gcggcacaacccgaagtccaagccggacgcggtttgcgccgttccgaacagcccaagccg
tctgaagtcgcaaccgtccctgccgaagaaatgatccaagtcgaaacccggcaaggctga
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