Neisseria meningitidis FAM18 (serogroup C): NMC1987
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Entry
NMC1987 CDS
T00458
Name
(GenBank) putative DNA helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nmc
Neisseria meningitidis FAM18 (serogroup C)
Brite
KEGG Orthology (KO) [BR:
nmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmc03019
]
NMC1987
Enzymes [BR:
nmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NMC1987
Messenger RNA biogenesis [BR:
nmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NMC1987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
HA2_N
WH_GTF3C1_N
TraI_middle
zf_C2H2_ZNF598
Motif
Other DBs
NCBI-ProteinID:
CAM11145
UniProt:
A1KW88
LinkDB
All DBs
Position
2032242..2035541
Genome browser
AA seq
1099 aa
AA seq
DB search
MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPKIARI
LLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIWDSF
QRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRLSEIK
QLTSSENQGDQDLSAKRKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPD
GNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAVIQPEWIEQEAPHLV
RYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVPYGKVAPEEAREIFIRSALVAQECD
LKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLPEMAWKDAQGSVWGSED
SVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWVENPTSAATAKTVGFDNPT
YATQQPTPSPAREGRGEGKTVAAQTNFSATAANPLPQEREQSAAASAVSNDLHPANPQQT
APSPVGEGWGEGKTVATQTNFSATTANPLPNPLPQEGEQSAAASAVSNDPQPQKQPAPQK
DRLKPLPLADIRTFQAWLKTAERENPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKF
ELSYRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPGMLREKIQLLIKALPKQIRRICV
PVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRIFEQINQDEWAAFRLPEHCYFNLR
IIDDGGQELAIGRDLIQIQQQLGQAAAVTFRDNTQEFERDNVTTWDIGILPESIKFARGK
QQLTGYLGLQKEKDGRIALRLFDTIEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQ
AAMLLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRY
LQETAAAYAELNSKLGKHPLTHLLRQRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLE
KYSSNPARDAAREADIQELEQMWQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQEL
KTPYPVSVKRLLKMWEDLN
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatatgaaaaaccaagtacgcggatcaggcatggatgcacgatccaatccggcc
aatgtttcagacggcctgcaaaacagttcgggtcatatcggtaccaacacgcgttaccgc
ctgaccaaactcggcgaacaaatggcgcgcctgcccatcgacccgaaaatcgcgcgcatt
ttgttggcggcgaagaagcacgactgcatggcggaaatattggtgatcgcgtccgcgctg
tcgattcaagacccgcgcgagcggccgctggaagcgcgcgatgccgccgccaaggcgcac
gagcgttttaccgacaagcaatctgactttcttgcctatctgaacatttgggacagcttc
cagcgcgagcgcgacaagggcttgtccaacaagcagttggtgcagtggtgccgtcaatat
ttcctgtcgcacctgcggatgcgcgagtggcgcgagctgcaccaccagcttgcccaaacc
gcgattgaaatgggtttgaccaccaaggaagcggctttcagacgactttccgaaatcaag
cagcttacgtcgtctgaaaaccaaggcgatcaagacttatccgccaaacgcaaacaaaaa
caactggataagaaacaacaccgcgcccaaatccgcgccgccaaagaagcgggctacgaa
caaatccaccgcgccctgctcaccggccttatcgccaacgtcggcatgaaatcgcccgac
ggcaacgactataccggcgcgcgcggcagccgtttccaccttttccccgcctccgccctg
ttcaaagccaaacccaaatgggtgatggcggcagaactcgttgaaacgacaaaactttat
gcgcgcgacgtcgccgttatccagcccgaatggattgagcaggaagccccgcacctcgtc
cgctaccactatttcgagccgcactgggaacaaaaacgcggcgaagtcgtcgccagcgaa
cgcgtgacgctttacggcctgaccgtattgccgcgccgccccgtgccttacggcaaagtt
gcgcccgaagaagcacgtgaaatctttatccgcagcgcgttggtggcgcaggaatgcgat
ttgaaagcggatttttttgtccacaataaaaagctgattaaagaaattaccgaactcgaa
cacaaatcgcgcaagcaagacgtattggtcgacgacgaagccctgtttgcgttttataac
gaacgcctgcccgaaatggcttggaaagacgcgcaaggcagcgtttggggaagtgaagat
tccgtacggattattgaatctgacaaagccgagaggtcgtctgaaaatgagcgcaacgag
tttcgtaaaaacaagcgtaatgggtctcgccaaaatgaaaatcacggcaacaccgtaggt
tgggttgaaaacccaacatcagccgcaactgcaaaaactgttgggtttgacaacccaacc
tacgctactcagcaacccaccccctcccccgcgagggagggtcggggagagggcaaaaca
gttgccgcacaaaccaacttttccgcaaccgcagcaaaccctctcccgcaggagagggag
cagagtgccgcagcttcagcggtttcaaacgacctgcatcctgcaaatccccaacaaacc
gccccctcccccgtgggggagggctggggagagggcaaaacagttgccacccaaaccaac
ttctccgcaaccacagcaaaccctctccctaaccctctcccacaggagggggaacagagt
gccgcagcttcagcggtttcaaacgaccctcaaccccaaaagcagccagcaccccaaaaa
gaccgtctgaaacccctccccctcgccgacatccgcaccttccaagcctggctcaaaacc
gccgaacgcgagaacccgcgcctgctgttcctcagccgcgacgatttgatgcaacacgcc
gccgcacacattaccgaagaacaattccccaaattctggcaaaccgcagacggcaagttc
gaactcagctaccgcttcgagccgcaccacccgctcgacggcgttaccctcaccctgccg
cttaccgtgctcaaccgcatcagccccgccgccctcgaatggctcgtgcccggtatgttg
cgcgagaaaatccagctgctgattaaagcactgcccaagcaaatccgccgcatctgcgtg
cccgtgcccgaattcatcacccaatttttaagccaaaaccccgaccgcaacgcccccatc
ctgccccaactcgcccaagccatcgccaaaaccgcaggcgacatccgcatattcgagcaa
atcaaccaagacgaatgggccgcgttcaggctgcccgaacactgctatttcaacctccgc
atcatcgacgacggcggacaagaattagccatagggcgcgatttaatccaaatccaacaa
caactcggccaagccgccgccgttaccttccgcgacaacacccaagaattcgagcgcgac
aacgtgaccacatgggacatcggcatcctgcccgaatccatcaaattcgcacgcggcaaa
caacagcttaccggctatctcggcctgcaaaaagaaaaagacggccgcatcgccctgcgc
ctgttcgacacaatagaagccgccgaacaggcacaccgtcaaggcgtgatagaactcatg
aaactacaactaaaagaacaagttaaagacctgaacaaaggcatccaaggcttcacccaa
gccgccatgctgctcaaacacatcaacgccgacaccctgcgcgacgacctcacccaagcc
gtctgcgaccgcgcctttatcggcgaagacgagctgccgcgtaacgaaaaagcctttaaa
gagcaaatcaaacgcgcccgcagccgcctgcctgccgtcaaagaagccctcagccgctac
ctgcaggaaaccgcagccgcctacgccgaactcaacagcaaactcggcaaacacccattg
acccacctcctacgccaacgcctgcaaaccctgctcgccgccggcttcgccacccgcacc
ccgtgggcacaatggccgcgcctccccatctacctcaaagccatgaccctgcgcctcgaa
aaatacagcagcaaccccgcccgcgacgcagcccgcgaagccgatatccaagagctggaa
caaatgtggcaggaaaaaacagacagcctgattaaacaaggtctccccatttcagacggc
ctcgccgcgtttaaatggatgattgaagaattgagggtgtcgctgttcgcgcaggaattg
aagacaccgtatccggtgtcggtgaagcggttgttgaagatgtgggaggatcttaattaa
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