Neisseria meningitidis G2136 (serogroup B): NMBG2136_1903
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Entry
NMBG2136_1903 CDS
T01929
Name
(GenBank) ATP-dependent RNA helicase hrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nmd
Neisseria meningitidis G2136 (serogroup B)
Brite
KEGG Orthology (KO) [BR:
nmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmd03019
]
NMBG2136_1903
Enzymes [BR:
nmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NMBG2136_1903
Messenger RNA biogenesis [BR:
nmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NMBG2136_1903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
WHD_HA2
WHD_GTF3C1_N
TraI_middle
zf_C2H2_ZNF598
Motif
Other DBs
NCBI-ProteinID:
ADY94556
LinkDB
All DBs
Position
2039929..2043219
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AA seq
1096 aa
AA seq
DB search
MKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPKIARILLA
AKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIWDSFQRE
RDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRLSEIKQLT
SSENQGDQDLSAKRKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPDGND
YTGARGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAVIQPEWIEQEAPHLVRYH
YFEPHWEQKRGEVVASERVTLYGLTVLPRRPVPYGKVAPEEAREIFIRSALVAQECDLKA
DFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLPEMAWKDAQGSVWGSEDSVR
IIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWVENPTSAATAKTVGFDNPTYAT
QQPTPSPAREGRGEGKTVAAQTNFSATAANPLPQEREQSAAASAVSNDLHPANPQQTAPS
PVGEGWGEGKTVATQTNFSATTANPLPNPLPQEGEQSAAASAVSNDPQPQKQPAPQKDRL
KPLPLADIRTFQAWLKTAERENPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFELS
YRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPGMLREKIQLLIKALPKQIRRICVPVP
EFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRIFEQINQDEWAAFRLPEHCYFNLRIID
DGGQELAIGRDLIQIQQQLGQAAAVTFRDNTQEFERDNVTTWDIGILPESIKFARGKQQL
TGYLGLQKEKDGRIALRLFDTIEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAM
LLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQE
TAAAYAELNSKLGKHPLTHLLRQRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYS
SNPARDAAREADIQELEQMWQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTP
YPVSVKRLLKMWEDLN
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccaagtacgcggatcaggcatggatgcacgatccaatccggccaatgtttca
gacggcctgcaaaacagttcgggtcatatcggtaccaacacgcgttaccgcctgaccaaa
ctcggcgaacaaatggcgcgcctgcccatcgacccgaaaatcgcgcgcattttgttggcg
gcgaagaagcacgactgcatggcggaaatattggtgatcgcgtccgcgctgtcgattcaa
gacccgcgcgagcggccgctggaagcgcgcgatgccgccgccaaggcgcacgagcgtttt
accgacaagcaatctgactttcttgcctatctgaacatttgggacagcttccagcgcgag
cgcgacaagggcttgtccaacaagcagttggtgcagtggtgccgtcaatatttcctgtcg
cacctgcggatgcgcgagtggcgcgagctgcaccaccagcttgcccaaaccgcgattgaa
atgggtttgaccaccaaggaagcggctttcagacgactttccgaaatcaagcagcttacg
tcgtctgaaaaccaaggcgatcaagacttatccgccaaacgcaaacaaaaacaactggat
aagaaacaacaccgcgcccaaatccgcgccgccaaagaagcgggctacgaacaaatccac
cgcgccctgctcaccggccttatcgccaacgtcggcatgaaatcgcccgacggcaacgac
tataccggcgcgcgcggcagccgtttccaccttttccccgcctccgccctgttcaaagcc
aaacccaaatgggtgatggcggcagaactcgttgaaacgacaaaactttatgcgcgcgac
gtcgccgttatccagcccgaatggattgagcaggaagccccgcacctcgtccgctaccac
tatttcgagccgcactgggaacaaaaacgcggcgaagtcgtcgccagcgaacgcgtgacg
ctttacggcctgaccgtattgccgcgccgccccgtgccttacggcaaagttgcgcccgaa
gaagcacgtgaaatctttatccgcagcgcgttggtggcgcaggaatgcgatttgaaagcg
gatttttttgtccacaataaaaagctgattaaagaaattaccgaactcgaacacaaatcg
cgcaagcaagacgtattggtcgacgacgaagccctgtttgcgttttataacgaacgcctg
cccgaaatggcttggaaagacgcgcaaggcagcgtttggggaagtgaagattccgtacgg
attattgaatctgacaaagccgagaggtcgtctgaaaatgagcgcaacgagtttcgtaaa
aacaagcgtaatgggtctcgccaaaatgaaaatcacggcaacaccgtaggttgggttgaa
aacccaacatcagccgcaactgcaaaaactgttgggtttgacaacccaacctacgctact
cagcaacccaccccctcccccgcgagggagggtcggggagagggcaaaacagttgccgca
caaaccaacttttccgcaaccgcagcaaaccctctcccgcaggagagggagcagagtgcc
gcagcttcagcggtttcaaacgacctgcatcctgcaaatccccaacaaaccgccccctcc
cccgtgggggagggctggggagagggcaaaacagttgccacccaaaccaacttctccgca
accacagcaaaccctctccctaaccctctcccacaggagggggaacagagtgccgcagct
tcagcggtttcaaacgaccctcaaccccaaaagcagccagcaccccaaaaagaccgtctg
aaacccctccccctcgccgacatccgcaccttccaagcctggctcaaaaccgccgaacgc
gagaacccgcgcctgctgttcctcagccgcgacgatttgatgcaacacgccgccgcacac
attaccgaagaacaattccccaaattctggcaaaccgcagacggcaagttcgaactcagc
taccgcttcgagccgcaccacccgctcgacggcgttaccctcaccctgccgcttaccgtg
ctcaaccgcatcagccccgccgccctcgaatggctcgtgcccggtatgttgcgcgagaaa
atccagctgctgattaaagcactgcccaagcaaatccgccgcatctgcgtgcccgtgccc
gaattcatcacccaatttttaagccaaaaccccgaccgcaacgcccccatcctgccccaa
ctcgcccaagccatcgccaaaaccgcaggcgacatccgcatattcgagcaaatcaaccaa
gacgaatgggccgcgttcaggctgcccgaacactgctatttcaacctccgcatcatcgac
gacggcggacaagaattagccatagggcgcgatttaatccaaatccaacaacaactcggc
caagccgccgccgttaccttccgcgacaacacccaagaattcgagcgcgacaacgtgacc
acatgggacatcggcatcctgcccgaatccatcaaattcgcacgcggcaaacaacagctt
accggctatctcggcctgcaaaaagaaaaagacggccgcatcgccctgcgcctgttcgac
acaatagaagccgccgaacaggcacaccgtcaaggcgtgatagaactcatgaaactacaa
ctaaaagaacaagttaaagacctgaacaaaggcatccaaggcttcacccaagccgccatg
ctgctcaaacacatcaacgccgacaccctgcgcgacgacctcacccaagccgtctgcgac
cgcgcctttatcggcgaagacgagctgccgcgtaacgaaaaagcctttaaagagcaaatc
aaacgcgcccgcagccgcctgcctgccgtcaaagaagccctcagccgctacctgcaggaa
accgcagccgcctacgccgaactcaacagcaaactcggcaaacacccattgacccacctc
ctacgccaacgcctgcaaaccctgctcgccgccggcttcgccacccgcaccccgtgggca
caatggccgcgcctccccatctacctcaaagccatgaccctgcgcctcgaaaaatacagc
agcaaccccgcccgcgacgcagcccgcgaagccgatatccaagagctggaacaaatgtgg
caggaaaaaacagacagcctgattaaacaaggtctccccatttcagacggcctcgccgcg
tttaaatggatgattgaagaattgagggtgtcgctgttcgcgcaggaattgaagacaccg
tatccggtgtcggtgaagcggttgttgaagatgtgggaggatcttaattaa
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