Neisseria meningitidis MC58 (serogroup B): NMB0196
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Entry
NMB0196 CDS
T00027
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nme
Neisseria meningitidis MC58 (serogroup B)
Pathway
nme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMB0196 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nme03019
]
NMB0196 (rne)
03009 Ribosome biogenesis [BR:
nme03009
]
NMB0196 (rne)
Enzymes [BR:
nme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NMB0196 (rne)
Messenger RNA biogenesis [BR:
nme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMB0196 (rne)
Ribosome biogenesis [BR:
nme03009
]
Prokaryotic type
rRNA processing factors
NMB0196 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
AAF40653
UniProt:
Q9K1F8
LinkDB
All DBs
Position
complement(197445..200204)
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AA seq
919 aa
AA seq
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MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDY
GTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL
AGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEW
DLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAE
FMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSID
VNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL
RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHV
LRIIQEEAMKDNTGEVRAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHY
EINRIRTDDVEEDGEPSYKRVAEPEEDESAKPFGGEKAKAARPEPAVKGVRHTSPAPTAA
PEKKTSWWDSFKAWLKRIFGGSETQAAPAAETSEKRSTANRSGSRANNRRQNPRRSKREG
SKVEVREVAGKTAGQEARADKAETRNNGNRRRNERGDRAAERANEAEIQSRNVQPAATVA
DAAPSETEVQTGKRRRNGSRSERGQTAPETATVAETTVQTAENTPSEPHTAEDKGSKPKS
ERNRRERDSRDAKERRERNNQRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVF
GETDANAPITVSIADPVAERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAE
AQEMPSETATFTAAAEQARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKP
SEVATVPAEEMIQVETRQG
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttatttaacgcaacgcaggccgaagagctgcgcgttgccatcgtcgac
ggacaaaacctgctggatttggacatcgaaacgctgggcaaagaacagcgcaaaggcaat
atctacaaaggcatcattacccgcatcgagccgtcgctggaagcgtgtttcgtggattac
ggaaccgaccgccacggcttcttgccgtttaaagaagtctcccgctcatacttccaagac
tacgaaggcggacgcgcgcgcatccaagacgtgctcaaagaaggcatggaagtcatcgtc
caagtcgaaaaagacgagcgcggcaacaaaggcgccgcgctgaccaccttcatcagcctc
gccggacgctatctggtattgatgccgaacaacccgcgcggcggcggcgtatcccgccgt
atcgaaggtgaagagcgtcaagagttgaaagccgccatggcggaactcgacattccgaac
ggcatgagcatcatcgcccgtaccgccggcatcggccgcagcgcggaagagttggaatgg
gacttgaactacctcaaacaactctggcaggcgattgaagaagcaggaaaagcgcatcac
gacccctacctgctctttatggaaagctcgctgctgatccgagccatccgcgactatttc
cgccccgacatcggcgagattttggtggacaatcaagaagtttacgaccaagttgccgag
ttcatgagctacgtcatgccgggcaatataggccgtctgaaactctacgaagaccacacg
ccgctgttttcccgcttccaaatcgaacaccaaatcgaaagcgcgttttcgcgcagcgtc
agcctgccctccggcggcgcgatcgtcatcgaccataccgaagccctcgtctccatcgac
gtgaactccgcacgcgccactcgcggcgcagacattgaagacaccgcgttcaaaaccaat
atggaagccgccgaagaagtcgcccgacaaatgcgcctgcgcgacttgggcggcttggtc
gtcatcgacttcatcgacatggaaaaccccaaacaccagcgcgatgtggaaaacgtcctg
cgcgacgcgctcaaaaaagaccgcgcccgcgtgcagatgggcaaactctcccgtttcgga
cttttagaattgagccgccaacgtttgaaaccggctttgggcgaaagcagccacgtcgcc
tgtccgcgctgcgccggcaccggcgtgattcggggcatcgaatccaccgccctgcacgtt
ttacgcatcattcaagaagaagcgatgaaggacaacaccggagaagtgcgcgcacaagtg
cccgtcgatgtcgccaccttcctgctgaacgaaaaacgcgccgagctgtttgcgatggaa
gagcgtttggatgtcaacgtcgtcctgattccgaacatccacctcgaaaatccgcactac
gaaatcaaccgcatccgcaccgacgacgtagaagaagacggcgaaccgagctacaaacgc
gtcgccgagccggaagaagacgaatccgccaaaccgttcggcggcgaaaaagccaaagcc
gcccgtcccgaacccgccgtcaaaggcgtgcgccacaccagccccgccccgactgccgcc
cccgagaaaaaaacctcttggtgggacagcttcaaagcatggctcaaacgcattttcggc
ggcagcgaaacccaagccgcgcccgctgccgaaacctccgaaaaacgcagcacggcaaac
cgcagcggcagccgcgccaacaaccgccgccaaaacccgcgccgcagcaaacgcgaaggc
agcaaagtagaagtccgcgaagtggcaggcaaaactgccggacaggaagcgcgtgccgac
aaagccgaaacgcgcaacaacggcaaccgccgccgcaatgaacgcggcgaccgtgccgcc
gaacgcgccaacgaagcggaaatccaaagccgcaacgtacagcctgccgcaaccgttgca
gatgccgcaccgtccgaaaccgaagtgcaaaccggaaaacgccgccgcaacggcagccgc
agcgaacgcggccaaaccgcgccggaaaccgccaccgttgccgaaacaaccgttcagaca
gcggaaaacacgccgtccgaaccgcataccgcagaagacaaaggcagcaagcccaaatcc
gaacgcaaccgccgcgaacgcgacagccgagatgccaaagaacgccgcgagcgcaacaat
cagcgcgaccgccgtcaaaacggcaaaaaacgcaatattccgtctgccgccaaaatcgag
cagtacctgaatattcacgacaccgccgacaaagtccgttccgccgccgcgcacgttttc
ggcgaaaccgacgcaaacgcgccgattactgtcagcattgccgatccggttgcagaaagg
gatcttccgacagcatctcccgccgtttcaaacggcgacgcaccggtttatgatgcggcg
gaaaaaatccgccgtgccaccgccgccatcctgcccgaaggcgcgacaccgaaagccgaa
gcacaggaaatgccgtctgaaaccgcaacctttacggctgcggcggaacaggcacgggaa
accgcacaaaccggcggactcgtcctgatcgaaaccgaccctgccgcattgaaggcatgg
gcggcacaacccgaagtccaagccggacgcggtttgcgccgttccgaacagcccaagccg
tctgaagtcgcaaccgtccctgccgaagaaatgatccaagtcgaaacccggcaaggctga
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