Neisseria meningitidis MC58 (serogroup B): NMB1422
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Entry
NMB1422 CDS
T00027
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nme
Neisseria meningitidis MC58 (serogroup B)
Pathway
nme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMB1422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nme03019
]
NMB1422
Enzymes [BR:
nme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NMB1422
Messenger RNA biogenesis [BR:
nme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMB1422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
Helicase_C_2
Nexin_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AAF41783
UniProt:
Q9JYU9
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All DBs
Position
1456836..1458209
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AA seq
457 aa
AA seq
DB search
MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLP
SLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGYIKNLPLRHTVLFGGMNMD
KQTADLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLDEADRMLDMGFIDDIRKIMQM
LPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLL
ERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGNL
RVLVATDIAARGLDIAELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISLMDESEQKM
FESIKELTGNKLLIERIEGFEPQWWEQGGAKPEKPEMREPRQRNRYESAKAQREKNTRPE
NAANDAGAACGKIAGRSRRSRREHRTCALLQPRYGVK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatccattttcctctttaggtttgggtacggaactcgtttccgcactgaccgcg
caaggttacgaaaacccgacgcccatccaagccgccgccattcccaaagcactcgccggt
catgatttgctagccgccgcgcaaaccggcacaggcaaaaccgccgcctttatgctgccc
agtctggaacgcctcaaacgttacgccaccgccagcacctcgcccgcgatgcaccccgtg
cgtatgctcgtcctcacccccacgcgcgaacttgccgaccaaatcgaccaaaacgtgcag
ggctacatcaaaaacctgccgctgcgccacaccgtcttgttcggcggtatgaatatggac
aaacagaccgccgacctgcgtgccggctgcgaaatcgtcgtcgccaccgtcggacggctg
ctcgaccacgtgaaacagaaaaacatccatttgaacaaagtcgaaatcgtcgttttggac
gaagccgaccgtatgctggatatgggttttatcgacgacatccgcaaaatcatgcagatg
ctgccccgccaacgccaaaccctgctcttttccgccaccttctccgccccgatacgcaaa
ctggcgcaagacttcatgaacgcgcccgaaaccgtcgaagtcgccgcgcaaaacaccacc
aacgccaacgtcgagcagcacatcatcgccgtcgataccattcagaagcgcaacctgctc
gaacggctgattgtcgatttgcatatgaaccaggtcatcgtgttctgcaaaaccaaacaa
agcgtcgaccgcgtaacgcgcgaactggtgcgccgcaacctgtccgcacaggcgatacac
ggcgaccgttcccaacaaagccggctcgaaacactcaacgccttcaaagacggcaacctg
cgcgtcctcgtcgccaccgacatcgccgcgcgcgggctggacattgccgaactgcccttc
gtcatcaattacgaaatgcccgcccagcccgaagactacgtccaccgcatcgggcgcacg
gggcgcgcgggcgcggacggcgtggcgatttccctgatggacgaatccgaacagaaaatg
tttgaatccattaaagagctgaccggcaacaagctgctcatcgagcgcatcgagggcttc
gagccgcaatggtgggaacagggcggcgcaaaaccggaaaaacccgaaatgcgcgaaccg
agacaacgcaaccgctacgaatccgccaaagcgcaacgcgaaaaaaacacccggccggaa
aatgcggcaaacgatgcgggcgcggcttgcggaaaaattgccggacgcagccgccgaagc
cgccgggaacaccggacgtgcgccctgctccaaccgcgttacggcgtaaaatag
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