| Entry |
|
|---|
| Name |
(GenBank) ATP-dependent RNA helicase HrpA, truncation
|
|---|
| KO |
|
|---|
| Organism |
nme Neisseria meningitidis MC58 (serogroup B)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:nme00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:nme03019]
NMB2011
Enzymes [BR:nme01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NMB2011
Messenger RNA biogenesis [BR:nme03019]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NMB2011
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
2124759..2128178
|
|---|
| AA seq |
1139 aa
MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQIARLPIDPKIARI
LLAAKKHDCMAEILVIASALSIQDPRERPLEARDASAKAHERFTDKQSDFLAYLNIWDSF
QRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRPPEVR
QLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPD
GNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTRLYARDVAVIQPEWIEQEAPHLV
RYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVSYGKVAPEEAREIFIRSALVAQECD
LKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLPEMAWKDAQGSVWGSED
SVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWVENPTSAATAKTVGFDNPT
YAAQQTTPSPVGEGRGEGKTVAAQTNFSATAANPLPNPLPQEREQSAAASTISDDLRPAN
LQQTAPSPVGEGWGEGKTVATQTNFSATSTNPLPQEREQSASASTFSDDLRPANLQQPSP
SPVGEGWGEGKTVATQTNFSATSTLSDDSKPKKQPAPQKNRLKPLPLADIRTFQAWLKTA
ERDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTMTVPL
TVLNRLHAPSLEWLVPGMIREKIQLQIKALPKQIRRICVPVPEFITQFLSQNPDRNAPIL
PQLAQAIAKTAGDIRIFEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAGGRKLHELQQQ
LGQAAAVTFRDNTQEFERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRL
FDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAV
CDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAVYAELNSKLGKHPLT
HLLRLRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQ
MWQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEKIEK |
|---|
| NT seq |
3420 nt +upstreamnt +downstreamnt
atgcaaaatatgaaaaaccaagtacgcggatcaggcatggatgcccgatccaatccggcc
aatgtttcagacggcctgcaaaacagttcgggtcatatcggtaccaacacgcgttaccgc
ctgaccaaactcggcgaacagatagcgcgcctacccatcgacccgaaaatcgcgcgcatt
ttgctggcggcgaagaaacacgactgcatggcggaaatattggtgattgcgtccgcgctg
tcgattcaagacccgcgcgagcggccgctagaagcgcgcgatgcctcagccaaggcgcac
gagcgttttaccgacaagcagtccgatttccttgcctatctgaacatttgggacagcttc
cagcgcgaacgcgataaaggcttgtccaacaagcagctggtgcagtggtgccgccaatat
ttcctgtcgcacctgcggatgcgcgagtggcgcgagctgcaccaccagcttgcccaaacc
gcgattgaaatgggtttaaccaccaaggaagccgctttcagacgacctcccgaagtcagg
cagctcacgtcgtctgaaaatgcgggtgaccaagacctatctgctaaactcaaacaaaaa
caactggataaaaagcaacaccgcgcccaaatccgcgccgccaaagaagcgggctacgaa
caaatccaccgcgccctgctcactggccttatcgccaacgtcggcatgaaatcgcccgac
ggtaacgactacaccggcgcgcgcggcagccgcttccaccttttccccgcctccgccctg
ttcaaagccaaacccaaatgggtgatggcggcagaattggttgaaaccacgcgcctttac
gcgcgcgacgtcgccgttatccagcccgaatggatagagcaggaagcgccgcacctcgtc
cgctatcattatttcgagccgcattgggaacaaaaacgcggcgaagtcgtcgccagcgaa
cgcgtgacgctttacggtctgaccgtattgccgcgccgccccgtgtcttacggcaaagtt
gcccccgaagaagcgcgcgaaatctttatccgcagcgcgttggtggcgcaggaatgcgat
ttgaaagcggatttttttgtccacaacaaaaagctgattaaagaaattaccgaactcgaa
cacaaatcgcgcaagcaagacgtgctggtcgatgacgaagccctgtttgcgttttataac
gaacgactgcccgaaatggcttggaaagacgcgcaaggcagcgtttggggaagtgaagat
tccgtacggattattgaatctgacaaagccgagaggtcgtctgaaaatgagcgcaacgag
tttcgtaaaaacaagcgtaatgggtctcgccaaaatgaaaatcacggcaacaccgtaggt
tgggttgaaaacccaacatcagccgcaactgcaaaaactgttgggtttgacaatccaacc
tacgctgcccaacaaaccaccccctcccccgtgggggagggtcggggagagggcaaaaca
gttgccgcacaaaccaacttttccgcaaccgcagcaaaccctctccctaaccctctcccg
caggagagggaacagagtgccgcagcttcaacgatttcagacgacctgcgtcctgcaaat
ctgcagcaaaccgccccctcccccgtgggggagggctggggagagggcaaaacagttgcc
acacaaaccaacttttccgcaacctcaacaaaccctctcccgcaggagagggaacagagt
gcctcagcttcaacgttttcagacgacctgcgtcctgcaaatctgcagcaaccctctccc
tcccccgtgggggagggctggggagagggcaaaacagttgccacacaaaccaacttttcc
gcaacctcaacactttcagacgactccaaacccaaaaagcagcctgcaccccaaaaaaac
cgtctgaaacccctacccctcgccgacatccgcaccttccaagcctggctcaaaaccgcc
gagcgcgacaatccgcgcctgctgttcctcagccgcgacgatctgatgcaacacgccgcc
gcacacattaccgaagaacagttccccaaattctggcaaaccgcagacggcaaattcaaa
ctttcctaccgcttcgagccgcaccatccgctagacggcgtgaccatgaccgtgccgctg
accgtcctcaaccgcctgcacgcgccgtcgctcgaatggctggtgcccggcatgatacgc
gaaaaaatccagttgcaaatcaaagcactgcccaagcaaatccgccgcatctgcgtgccc
gtgcccgaattcatcacccaatttttaagccaaaaccccgaccgcaacgcccccatcctg
ccccaactcgcccaagccatcgccaaaaccgcaggcgacatccgcatattcgagcaaatc
aaccaagacgaatgggccgcgttcaggctgcccgaacactgctatttcaacctccgcatt
atcgacgacggcggacaagagcttgccggcggccgcaaactgcacgaattgcaacaacaa
ctcggtcaagctgccgccgttaccttccgtgacaacacccaagaatttgagcgcgacaac
gtcaccgcatgggacatcggcaccctgcccgaatccatcaaattcgcacgcggcaaacaa
cagctcaccggctatctcggcctacaaaaagaaaaagacggccgcatcgccctgcgcctg
tttgataccacagaagccgcagagcaggcacaccgtcaaggtgtcatcgaattgatgaag
ctgcaattaaaagagcaggtaaaggatttgaacaaaggcatccaaggcttcacccaagct
gccatgctgctcaaacacatcaacgccgacactctgcgcgacgacctcacccaagccgtc
tgcgaccgcgcctttatcggcgaagacgagctgccgcgcaacgaaaaagccttcaaagaa
caaatcaaacgcgcccgcagccgcctgcccgccgtcaaagaagccctcagccgctacctg
caggaaaccgccgccgtctacgccgaactcaacagcaaactcggcaaacacccattgacc
caccttctaagactacgcctgcaaaccctgctcgccgccggcttcgccacccgaaccccg
tgggcacaatggccgcgcctccccatctacctcaaagccatgaccctgcgcctcgaaaaa
tacagcagcaaccccgcccgcgacgcagcccgcgaagccgatatccaagagctggaacaa
atgtggcaggaaaaaacagacagcctgattaaacaaggtctccccatttcagacggcctc
gccgcgtttaaatggatgattgaagaattgagggtgtcgctgttcgcgcaggaattgaag
acaccgtatccggtgtcggtgaagcggctgttgaaagagtgggaaaaaattgaaaaataa |
|---|
