Nomia melanderi (Alkali bee): 116424394
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Entry
116424394 CDS
T07404
Name
(RefSeq) DNA polymerase beta-like
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116424394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116424394
Enzymes [BR:
nmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116424394
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
116424394
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
116424394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_5
Cdd1
HHH
HHH_3
NTP_transf_2
HHH_2
DUF4332
DUF3701
TPD52
Motif
Other DBs
NCBI-GeneID:
116424394
NCBI-ProteinID:
XP_031826600
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MGKRKASDNAGNPNQDLCDFLMELANYERNVSKNIYKYNAYRKASSTLSALPQRVESGKA
ARKLPGIGEKIAKKIDEFLNTGKLRKLEDINKDESNVAINLLTRISGIGPAKAKELVDSG
IKTIDDLKKHQDKLNHHQKIGLKYFKDFEERIPREEIQQSEKIMKDAIMKLDKGYILTVC
GSYRRGKAESGDIDVLLTHPTYTSKDKDSKKKVSLLKNVVECLQKKNFIVDTISLGPTKF
MGVCQVPNDHMLCRRLDIRLAPYDQYYCAVLYFTGSDLFNKNMRAHALEKKYTLNEYTLR
RLTPEGVPGEAEEITSEEDIFRILELPYKEPKDRDI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgaaaagcgagtgacaatgcagggaatccaaatcaagatttgtgtgacttt
ttaatggagttggcaaattatgaacgaaatgtcagcaaaaatatttacaagtataatgca
taccgcaaagcatctagtactttaagtgccttacctcaaagagtggagagtggtaaagca
gcaagaaagctgccaggaattggtgaaaagattgcaaaaaaaatagatgaattccttaat
acagggaagctacggaaactagaagatattaataaagatgaaagcaatgttgcaattaat
ttgttaacaagaatatctggtattgggcctgcgaaagcaaaagaattagtagattctggt
atcaaaaccatagatgatttaaagaaacatcaagataaactgaatcatcatcaaaaaatt
ggtctgaaatactttaaagacttcgaggaaagaattcctagagaagagatacagcagagt
gaaaaaattatgaaagatgctatcatgaaactggacaaggggtatattctaacagtctgt
ggaagttacagacgtggtaaagctgaaagtggagatattgatgttttattaacacatcca
acatatacttccaaagataaggactcaaaaaaaaaagtttcactcttgaagaatgttgtt
gaatgtttacagaagaaaaattttattgttgatacaatatcccttggaccaactaaattt
atgggtgtctgtcaagttccaaatgatcacatgttatgtagaagacttgacattaggcta
gcaccatatgatcagtattattgtgctgtactttatttcactggaagtgatcttttcaat
aaaaatatgagagctcatgctttggaaaaaaaatatactttaaacgaatatacattgcga
cgtcttactcctgaaggagtaccaggagaggcagaagaaataacatccgaagaagacatc
tttcgaattttggagttaccgtacaaagaaccaaaagatcgggatatttaa
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