Nomia melanderi (Alkali bee): 116424566
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Entry
116424566 CDS
T07404
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nmea03037
]
116424566
Cilium and associated proteins [BR:
nmea03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116424566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
ATG16
PUMA_CC
ERM_helical
Motif
Other DBs
NCBI-GeneID:
116424566
NCBI-ProteinID:
XP_031826989
LinkDB
All DBs
Position
Unknown
AA seq
1973 aa
AA seq
DB search
MSRPLSKGIPQLSTRGQMERRRPPFLRGPNKTKETDKTPSSKMDSSRSVTSGTGDRKDDE
DLSPDALVRQNFELRHRLEEEAANYKRRLDTYRQAQQHQAALVSRLQAKVLQYKQRCSEL
ENQVAETSAFDSNKLSSSIPVVTTPLDAAHQTLRDMREEQIHDLDTALKKLADERKKCET
LLQINTTLKDQLEESHQTNEALTNDLQKLSNDWDILREELAIKEDEWREEEQAFNEYYTS
EHNRLLNLWRDVVSVKRLFAEIKSSTERDLLKMRNNINCTFNDVSSVCTNIGFAMKMQAA
VNPMISQQVQHAQEQETTDLKMELNTLKQQYDVAQNEIRVKEDKINQLIRDIHTLEERCG
EAEAEVHRNVRVHEEVEILQSALRDIAHAVIQDAETREIESTQAPPHLHLTPSVSIPQKS
PKRGTRSTTTPAFAESTISAVQAALHKYQLTIHELQVKLQTNKEQLLTTRKQCENAEENI
KTLEKRVEELISELDTARSQCSQLNQEKDMLQKGLDTVRVEKNALDKSRVEINSMMENLN
NDYEKLQKTNNKLQKLCDNLEDEKLYLQSELSRVTKEAELREINLRSEEDRCSKMREELL
TLREELNKTYLAKDMLEQQKLETDGLISQIEKSKGDLELELERVMLEKSDVQEVLMKLES
LCSNHEQEKQRLQEELKKVTEEKNKLTSQCADQQSDLGSLRKELLQAEQIRLDLESEKVT
LNEKVKFLEIEKEKTEIELAQVTRERGDLSNQLSVLARKKETLNEELMRLRQRLEQANEM
NGRINRNLEDLIKDNEEKQVLLETNEKEVQRLQEQLASMRSEKETLEGVLFDTQTNLENM
HVKKTQLEKEQKELLVNKENLKGQVERLMKDLDNSEKRAQEMRQSLTQQSGDQEAEFHHI
ISNLKKHSEDNIKKLSEEKEQVKISLEKRLQQSLSQLTGEKDNEINQLQQRIDELQQQIE
NLCQQHEEVLLRAENDKQQALLMAHHDQQALMEKLEGVLREMEEEKNNVERIKREAAARA
EQERNNTKQWRDELSRLKTKLDENKLRSDEEKIKLDLKIEELWKERESAQRESEELQVQL
HMTEDRVDSLQNQLHETVRKLKDAETLNETLRKELVDVRRQLADSTYEKEKYHNSNKELR
EHVKRIESEKREQSRTLEESYQKIAALEDMKVTIDAERSRLQAQLRDMEREASQLQKQLR
FTQDELQKCHENNEQAQNDEKELQARLANETEERERLQLQLHQVKKQLVDVDNSLEATRQ
ELGRLRSRSDEDDERWRTREQELLVRLEDCRCKERKLEDQKHNLEVCLADASQQIQELKA
RLGGSEGRVRALDAQLSQLEMAKKETEQKLSSVGSTLRRIIGIQMDGSVNMPFKLMSPSR
RWSPARVQEHADSSRDIILDVDPEAVRKGVRSFMQQVAQIERERDDYKTELCNLKKQLTE
TQEIQHKSDSQINTLLANIRILQDEKNSLEVKLSQRQGSYDMQLNALQQKTDECEQLREK
VGNLELMISTSAEEKVQCEDKLEKMKQALSRVENEKRNLQEELNRSESRATKLELQRMSL
DGDLQRLQMMFQEKETNIHKLQERNETQGRAMASLEERCASLKSTIEQLNLTLEKSSNTE
SELKSEINTLQRNVLELTTSIQTSNEKTKQLQKQLTNTENERRVLTERIESLQQSLSDLK
RTNQTLTDQINRLQNELANNEVQRCTLESQLRIASFPQEETTNKDEELLRQLQAAQRERS
EMRGKVDALSDKVKMLEGDKRNLERQMSLIKSTSVRSKSYERPEKAHTELLGTSFDVDHY
EQENRELRLKVRRLETQLAEKEAELIRMKSSYVHSHSMYDFSRDRTGEIERLRAAQLQAE
KLLEAREQSHRQQVLRLENQIQLLREQLNQEIKRRQLYVLRSSRAGREMQQLRQALGDSL
RTVAQDPSLDAVLLEHEARKLDSTLTSTTSLPPSLALPPSSAYDRSSTPAQLK
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggccattatccaaaggtattccacagctatcaacgagaggacagatggaaagg
cggcggccaccgtttcttagagggcctaacaagacgaaagagacggacaaaaccccaagt
agtaaaatggattcatcaaggagtgttaccagtggtacgggagatagaaaggacgatgaa
gacttgtcgccagatgctttagtcaggcaaaattttgaactgcgtcatcgtcttgaagag
gaagccgctaattataaaaggagattagacacgtataggcaagcacagcaacatcaggca
gctcttgtttcccgtttacaagccaaagttttacaatataaacaaagatgttcagaactt
gaaaatcaggtcgcagaaaccagtgcatttgattcgaataaactctcttcttctatacca
gtggtaactactccattagatgcagcacatcaaacattaagggatatgcgtgaagaacag
attcatgatttagatactgccttaaaaaaactcgcagacgaacggaaaaagtgtgaaaca
ttgttacaaattaacacaacattaaaggaccaattggaagaatcgcatcaaacgaacgag
gcgctcaccaatgatctacagaagttaagcaatgactgggacatactgagagaagaacta
gctatcaaagaagacgaatggagagaagaggagcaagcatttaatgaatattacacttca
gagcacaatagattgttaaacctttggcgcgacgttgtttccgtaaaacgattatttgca
gagataaaatctagtacagaaagggacttgttaaaaatgaggaacaatattaattgtact
ttcaatgatgtctcatcagtgtgtactaacataggatttgctatgaagatgcaggctgct
gtaaacccaatgatatcccaacaagttcaacacgcacaggaacaggaaacgaccgacttg
aaaatggaattaaacacgcttaaacaacagtacgatgtagctcaaaacgagattcgtgta
aaggaagacaaaatcaatcagctcattcgtgacattcacactttggaggaaaggtgtgga
gaggcagaggcggaagtgcatcggaacgtccgtgtacacgaagaagttgaaattttacaa
tcagcattgagagacatagcgcacgctgtaattcaagatgcagaaacacgcgagattgaa
agtactcaggcgccgccgcatctccatctaactcctagcgtttccatcccccagaaatca
ccgaaaagaggtacaagaagcaccaccaccccagcctttgctgaaagtacaatcagtgct
gtacaagcagctctgcataaatatcaattgactatacacgagcttcaggtgaaattacaa
actaacaaggaacagctgttgaccactcgaaagcaatgcgagaatgccgaagaaaatatc
aaaactctggagaaacgggtggaagagttgatctctgaattagacacggcacgatcgcaa
tgctcgcaacttaaccaagagaaagatatgctacaaaaaggtctcgataccgtaagggta
gaaaagaatgcgcttgataaaagtagagttgaaattaatagtatgatggagaatctgaac
aacgattacgagaaattgcagaaaactaacaataaattacaaaaactctgtgataatctt
gaggacgagaaactatatctgcaaagcgaattgagtagagttaccaaagaagcggaatta
cgggagataaaccttcgttcggaggaggacagatgcagcaaaatgagggaggaattgttg
actttacgagaagagttaaataaaacgtatcttgccaaagacatgttggagcaacagaaa
ctagaaacagacggtctaatttctcaaattgaaaagagtaaaggggatttggaactggag
ttagaacgtgtaatgttggagaagtcagacgtgcaagaggtcttaatgaagctggaatcg
ctttgtagcaatcacgagcaagaaaaacagagactgcaggaagaactgaagaaggtgacg
gaggaaaagaataagttaacaagtcaatgcgcggatcaacaaagtgatttaggctccttg
aggaaggaactgcttcaggccgagcaaattagactggacttggaatcagaaaaagtcacg
ttgaacgagaaagtgaagtttttagaaatcgagaaggagaaaactgaaatagaattggca
caggtcacacgcgaacgtggagatctgagcaatcagttgtcggttttagcgcggaagaag
gagacgttgaacgaggaattgatgagactcaggcagagattggaacaggcaaatgagatg
aatgggaggatcaaccggaatttggaagatttaattaaagacaacgaagagaaacaggtg
cttctggaaaccaatgagaaagaagttcaacgtttgcaagaacagcttgcatcgatgcgc
agcgaaaaggaaacgctggaaggtgtcctgttcgacacgcaaaccaatctagaaaatatg
cacgtgaagaagactcagttggagaaggaacagaaagagctgttggtcaacaaggagaac
ttaaagggccaagtcgagaggctgatgaaggatttagacaacagcgagaaacgagcacaa
gagatgaggcaaagtttgacgcagcaaagcggcgatcaagaggctgaattccaccacatt
atttctaacttgaaaaagcatagcgaggataacattaaaaagctgagcgaagaaaaagaa
caagtgaaaataagcttagagaagcgacttcaacaatctctgtcgcaacttactggagag
aaggataacgagattaatcagttgcagcaaagaatagacgagctccagcaacaaatagaa
aatttgtgtcagcagcacgaagaggttcttctcagagcagaaaatgacaagcagcaagct
cttctgatggctcaccacgatcaacaggcattaatggagaaactcgaaggcgttttacga
gaaatggaagaagaaaagaacaacgtggagaggataaaaagggaggcagctgcgcgtgcc
gagcaagaacgtaacaataccaagcaatggcgtgacgaattgagtcgtctcaagacaaaa
ttggacgagaataaattgagatccgacgaagaaaaaataaagctcgatttgaagatcgag
gaactctggaaggaacgcgagtcagcgcaacgggaatcggaggagctgcaagttcagttg
catatgacggaagacagggtcgatagtttacaaaatcagctgcacgagacagtcagaaaa
cttaaagatgctgaaactcttaacgaaaccttgcgcaaggaattggtggatgtcagaaga
caattagctgactccacgtacgagaaggaaaagtaccacaacagcaacaaggaattacgg
gaacacgtgaaacgtattgaaagcgagaagagagaacaaagcaggacattggaagaatcg
taccaaaagattgcagctctggaggacatgaaagtaactatagacgcggaaaggtcgcgt
cttcaagcgcaacttcgggacatggagagagaggcttcgcaactacaaaagcagttacgg
tttacgcaggatgaattgcagaagtgtcacgaaaacaacgaacaagcgcaaaacgatgaa
aaagaattgcaagcacgattggcgaatgagacggaggaaagggagcgtttacaattgcaa
ctgcatcaagtgaagaaacagttggtagatgtggataatagtttggaagcgacaaggcaa
gagcttggaagactacgttcacgttccgacgaggacgacgaaaggtggaggacgagggag
caggaattgttagttcgactggaggactgtagatgcaaggaaagaaagctcgaagatcag
aagcacaacttggaagtatgcttggctgatgcttctcaacagattcaagaactgaaggcg
cgtcttggaggatccgagggacgagtcagagccctggatgctcagctgtcgcaactggaa
atggcgaagaaggaaactgaacaaaaattgagcagcgttggttctacattacggcgtatc
attggtattcaaatggatggaagtgtcaatatgccttttaaactgatgagtccttcgagg
agatggagtccagccagagttcaagaacacgctgactccagcagagatataatactcgac
gttgatcctgaagcagttaggaagggtgtgcgttctttcatgcaacaagtggcgcagatt
gaacgcgaaagggacgattataaaaccgaattgtgcaacctgaagaaacagttgacggaa
acccaagaaattcaacacaaatcagactctcaaataaacacgttattggctaatatcaga
attctgcaggatgaaaagaactcgttggaagtgaaactttctcaaagacaaggcagttat
gacatgcagctgaacgcattgcaacaaaaaacggacgaatgcgagcagttacgtgagaag
gttggaaaccttgaattaatgatcagcactagtgctgaagaaaaagtacaatgtgaagat
aagttggaaaagatgaaacaagctctgagtcgggtagaaaacgagaagcgcaatttacaa
gaggaactgaacagaagcgagtctcgggctaccaagctagaattacaaaggatgtcgttg
gacggtgaccttcaaagactgcaaatgatgttccaagagaaggaaacaaatattcataaa
ttgcaagaaaggaacgagacccagggtcgcgccatggccagtttagaggaacgttgtgct
tccttaaaatcaacaatagaacagctgaatttgacgttggaaaagtcatccaacacagaa
agtgaattgaagagtgaaattaataccctgcaacgtaacgttttggaattgaccacttcg
atacagacgtctaatgagaagaccaaacaactgcagaagcaactgacgaacactgaaaac
gaacggagagttttgacagagcgcatagaatcgttgcagcaatccttgagcgacttgaag
cgtacgaatcagacgttaacggatcagataaaccgcttacagaatgaactggcaaataac
gaagtccaacgctgcactttggagtcgcagttgaggatagccagtttcccacaagaggag
actacaaataaggacgaggagctgctgcgtcaattgcaggctgcacagagggagagaagc
gaaatgagaggaaaagtggatgcactcagcgataaggtgaagatgttagaaggcgataaa
cgtaatttggaacgtcagatgtcgttgattaagtcgaccagcgttcgcagtaagagctat
gaacgtccagagaaagcgcacacagaactattgggcaccagtttcgatgtggaccactat
gagcaggagaatagggaattaagattgaaagtccgcagattggaaactcagctggcggaa
aaagaagcggaactcataagaatgaaatcgagctacgttcacagccattcaatgtatgat
ttcagccgagatagaacgggagaaattgagagacttagagctgcacagctacaagcagag
aaactgttggaagcaagagaacagagtcatcgtcagcaagttttgcgtctggaaaatcag
attcagttactacgagaacaattgaatcaagaaataaaacgcagacagttgtacgtgttg
cgaagttcaagagctggtagggaaatgcagcaactgagacaagcgttgggcgactcgttg
agaacagtggcccaagatccatcgctggacgcagtattattagaacacgaagctcgtaaa
ctggattcgactttgacaagtaccaccagtttaccaccgtcgttagctttacctccgtca
tcagcgtacgacagatcttccacgcccgcacagctcaaatag
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integrated database retrieval system