Nomia melanderi (Alkali bee): 116425008
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Entry
116425008 CDS
T07404
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116425008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmea03041
]
116425008
Spliceosome [BR:
nmea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116425008
Complex C
U5 SnRNP specific factors
116425008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
116425008
NCBI-ProteinID:
XP_031828018
LinkDB
All DBs
Position
Unknown
AA seq
2374 aa
AA seq
DB search
MSIPPYLLGPNPWATMMAQQQAHAQLAAAQAHAQAAAHAQAAHHAHMQAITGPPLPQMPK
QPEVLSEDKLQEKAQKWQQLQSKRFAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMSSRK
YRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVY
IAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDSEED
ESVASWFYEHKPLVGTKHVNGSTYRRWNLTLPQMATLYRLANQLLTDLVDQNFFYLFDPK
SFFTAKALNMAIPGGPKFEPLVKDSNAADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYN
NMPHFVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRNSLKTVEPQIEDDEDFVLP
EEVQPFLQETPLYTDNTANGIALLWAPRPFNTRSGRTRRAIDIPLVKSWYREHCPPGQPV
KVRVSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGY
NMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSH
VQYRLNNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPV
GKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHF
DLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILR
YVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYI
SPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQR
EELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAY
LDQYLWYEADKRRLFPPWVKPSDTEPPPLLVYKWCQGINNLQDVWDVSEGECNVLLESKF
EKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIA
QYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTFQDVASETAHPIRLYCRYVDRIHLFLRF
SADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRL
PRSTTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEIT
KERTAQCFLRVDDESLQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNT
QELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLR
WSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNR
RLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHD
GKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNA
QRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHL
WQKVHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSR
PSLLADSKDLMDNTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGL
LIAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEP
YLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKI
IHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPN
IVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILR
ALHVNTERTKVVLKPDKTTITEPHHIWPSLTDDEWIKVEVQLKDLILADYGKKNNVNVAS
LTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITATTSN
YETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLR
AQIAGYLYGISPPDNPQVKEIRCIVMAPQWGTHQTVHLPNTLPNHQYLKEMEPLGWIHTQ
PNELPQLSPQDISTHARIMAENPIWDGEKTIVITCSFTPGSCSLTAYKLTPSGFEWGKQN
TDKGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPNMKYELQLANP
KEFYHEIHRPAHFLNFSSLEDGEGVGADREDVFA
NT seq
7125 nt
NT seq
+upstream
nt +downstream
nt
atgtctattccaccatatttgttgggcccaaatccatgggcaaccatgatggcccaacaa
caggctcatgcccaattagcagctgctcaagcgcatgctcaagcagcggctcatgcacaa
gctgctcatcatgctcatatgcaagcaatcacgggacctccgttgccacagatgcccaag
caacctgaagttttatcagaagataaacttcaagagaaagctcaaaaatggcaacagctt
cagtcgaagagatttgcagagaagagaaaatttggttttgtagatgctcagaaagaagat
atgcctccagaacacataagaaaaattattagagaccatggtgacatgagtagtcgtaaa
tatagacatgataaacgtgtttatttaggggcattgaagtacatgcctcatgcagtcatg
aaacttttagaaaatatgccaatgccttgggaacaaattcgagatgtgaaagtgttgtat
cacataacgggtgcaattacatttgtaaatgaaattccatgggttatagaacctgtatac
attgctcaatggggaacaatgtggattatgatgaggagagaaaagagggaccgtagacat
tttaaaagaatgagatttccgcctttcgatgacgaggaacctccactagattatgcggac
aacgttctagatgtagaacctttggaagctattcagattgaacttgattcagaggaagat
gaatctgtagcatcttggttctatgaacataaaccattagttggtacaaaacacgtgaat
ggatccacttatagaagatggaatttgacgttacctcagatggcgacattataccgcttg
gctaatcagttgttgacagacttggtggatcaaaattttttttatctttttgatccaaaa
tcatttttcaccgcgaaagcattaaatatggccatacctggcggtccgaagttcgaacca
ctggtaaaggattcaaatgcagctgatgaagactggaacgagtttaacgatataaataaa
attataattaggcaacctatcagaacggagtatcggatcgcatttccttatttgtacaat
aatatgccacactttgtacacttgtcctggtatcatgcaccaaacgtggtatacataaaa
actgaagatcctgatttacctgcattttattttgatccattgatcaatcctatttcgcat
agaaactcgttaaagactgtggaacctcaaatcgaagatgacgaggattttgtacttcct
gaagaggtgcagccattcctacaagaaacacctttgtatactgataacacggcaaatgga
atagctttactatgggctccaagaccatttaatacacgctctggtagaacgagaagagct
attgacatccccttggtaaaatcttggtacagagaacattgtcctcccggacaacctgtc
aaagttcgggtcagctatcagaaattgctaaaatatttcgttctgaatgctttgaaacac
agacctccgaaaccacagaagaaacgttacttgttccgatcgtttaagtcgacgaagttc
ttccaaaccaccacaatagattgggtcgaagctggtttacaagtgtgcagacagggatac
aatatgttaaatttattaattcatagaaagaatttgaattatcttcatttagattataat
ttcaatttgaaacctgtgaaaacgttaaccactaaagagaggaagaaatccagattcggg
aatgctttccacttgtgtcgtgagattctccgtctaacgaaattgatcattgattcccac
gtgcagtatcgtttgaacaatgttgacgcgtttcaacttgcggacgggctgcaatacatc
ttcgcgcatgtaggtcaattgaccggaatgtacagatataagtacaaattgatgaggcag
attagaatgtgcaaagatctgaaacatttgatctactatcgtttcaatacgggtcctgtt
ggaaaaggtcctggttgtggattttgggcacctggatggagggtatggctcttttttatg
agggggataactccgctgttggaaaggtggttaggaaatttgttgtccagacaattcgag
ggacgacactcgaagggtgtcgcgaaaacagttacgaagcagcgagtggagtcacatttc
gatcttgaattaagagcgtcggttatgcatgatatcgtagatatgatgccggagggaatc
aaacaaaataaagcccgaacgatactgcagcatcttagtgaagcctggagatgctggaaa
gctaatatcccttggaaggttcctggattgccaattcccattgaaaatatgattctccgt
tacgtgaagatgaaggctgactggtggaccaatacagcacattacaaccgagaacgtatt
agacgcggagcgactgtagataagactgtttgtaaaaagaatcttggacggctgactcgt
ttgtatttgaaggcggaacaggaacgccagcacaattacttaaaggacggtccatacatt
tctccggaagaagcagtagctatatacacgaccactgtgcactggttggaatccagaaga
tttgcacctataccattcccaccattatcttataaacacgacacgaagttgttgatatta
gctttggaacgtctcaaggaagcatacagtgtgaaatcgagattgaatcaaagccaacgc
gaggaacttggcttgatcgagcaagcttatgataatccgcacgaagcgttgtctagaatc
aagcgtcaccttttaacgcaaagagcgttcaaagaggtggggatcgaattcatggatctt
tacagccatctaattcctgtttatgacgttgaaccgcttgagaaaattacggatgcctac
ttggatcagtatctgtggtacgaagcggacaaacgaagactgttcccgccatgggtaaaa
ccttcggatacggaaccaccgccgttattagtatacaaatggtgtcaaggcatcaataat
ctgcaagacgtttgggacgtcagcgaaggagaatgcaatgtcttattggaatcgaaattt
gaaaaactgtacgagaaaattgaccttaccctattaaatagactgcttagattgattgtt
gatcacaatatagccgattatatgactgcaaagaataacgtcgttattaattacaaggat
atgaatcacacaaacagttacggaataatcagaggattgcagtttgcttcgtttatagcc
caatattacggtcttgtcttggacttgcttgtccttggattacaaagagccagcgaaatg
gctggacctccgcaaatgccaaacgactttttaactttccaagacgttgcttctgaaact
gcgcatcctatcaggttgtactgcagatacgtggatagaatacatttgtttttgagattc
tccgcagacgaggcaagagatttaattcaaagatatttgacggagcatccagaccccaat
aacgagaatatcgttggttacaataataaaaaatgttggccacgagacgcccggatgagg
cttatgaagcatgacgttaatctgggccgtgctgttttctgggacatcaaaaatcgttta
ccccgttccactaccacgatccaatgggaaaatagtttcgttagtgtatacagtaaagac
aatcctaatttgctgtttaatatgagcggtttcgaatgtcgaatactgcccaaatgcaga
accacgcatgaagagttcacccatcgagatggcgtgtggaatttgcagaatgagatcaca
aaggaaagaacggctcagtgtttcctacgagtggacgatgaaagtttgcaacgattccat
aacagagtccgacaaatcctcatggcgtccggttccacgacgttcacgaaaatcgtgaat
aaatggaacactgctttgatcggattaatgacctacttccgtgaagcggtggtgaacacg
caggaactgttagatctattggtcaaatgtgagaataaaattcaaacccgtattaagatt
ggacttaactcgaaaatgccttcccgatttccaccggtggtgttttacacgccaaaagaa
cttggcggattaggaatgctttcaatgggacacgtgcttataccgcagtctgacttaaga
tggtcgaaacaaaccgacgtcggtattacacacttccgttctggtatgagccacgacgag
gatcaactgatcccaaatttgtatcggtacattcaaccctgggaatcagaatttatcgat
tcgcaacgagtatgggcggaatacgcgttgaaacggcaagaggcgaacgcgcaaaatcga
agactcactttggaagatctcgaggacagttgggatcgcggaattccccgtataaacaca
ctgtttcagaaagatcgacatactcttgcttatgacaaaggctggagaatacgaaccgaa
tttaagcaataccaggtcttgaaacaaaatccgttctggtggactcatcaacgtcatgat
ggtaaactgtggaatttgaacaattacaggacagatatgatccaggctcttggtggtgta
gagggtatcttggagcatacgcttttcaaagggacatatttcccaacatgggaaggtctt
ttctgggagaaggcatccggcttcgaagaatctatgaagtataaaaaattaaccaacgcg
cagagatcaggtttgaatcagattcccaatcggcgattcacgttatggtggtccccgacc
atcaacagggcaaatgtatacgtcggtttccaggtgcaactggacttgacaggaatattt
atgcatggtaaaattccaaccttaaaaatatcattgatccaaatcttccgtgctcacttg
tggcaaaaggtacacgagtccattgttatggacctctgccaagttttcgatcaagaatta
gacgcgctggaaatcgaaactgttcaaaaagaaacgatacatcccagaaagtcgtacaaa
atgaattcttcgtgtgccgatatcttgctgttctccgcgtacaagtggaacgtatcgagg
ccatctttgctcgccgattcaaaagatctcatggataacactacaacgcaaaaatactgg
atagacgtgcaacttcgatggggagattacgattcacatgacattgaaagatacgccagg
gcaaagtttttggattacacaacggacaacatgtccatttatccgtcgcctacaggatta
ttgatcgccatcgatttggcgtacaatttgcatagtgcgtatggaaactggttcccgggt
tgtaagcctcttatacagcaagcgatggcgaagatcatgaaagcgaacccagctttgtac
gtgttacgagaacgtatcagaaaagcgttgcaactgtactcctcagaacctacagaaccg
tacttatcctcgcagaactacggagaactcttctcgaatcaaattatttggttcgtcgac
gataccaacgtttatcgtgttaccatccataaaacattcgagggcaatttaaccacgaaa
ccgataaacggagctattttcatttttaatcctcgaactggccaactgttcttaaaaatt
attcatacgtccgtttgggctggtcagaagcgtttgggtcagttggctaaatggaaaacc
gctgaagaagtggccgcgcttattcgatccttgccagtggaagaacaaccgaaacagatc
attgtaaccagaaagggaatgttggatcctctggaggtgcacttgctcgactttcccaac
attgttatcaaagggtcggaacttcagttgccgttccaagcttgcttgaaagttgaaaaa
ttcggcgacctgattttgaaagcaacggaaccgcaaatggtgttgttcaatttgtacgac
gactggttaaaaaccatttcctcgtatacggcattctcccggttgattctcattcttcgt
gcattacacgtcaataccgaaagaacaaaagttgttttgaaacctgacaagacgaccata
acggaacctcatcatatatggccttctttaacggacgatgaatggatcaaagtggaagtg
caactgaaagatctgatattggcggattatggaaaaaagaataacgtgaacgttgcatcg
ttaacccagtcggagatccgagatatcattttgggtatggaaataagcgcgccgtctgca
cagcgtcaacaaatcgccgaaatagaaaaacagacgaaagagcagtcacaacttacggca
acaaccacgaggacggtgaacaaacacggcgatgaaattattacggcaaccacttcgaat
tatgaaactcagacgttcagttcgaagaccgaatggcgagtaagagcgatctctgccaca
aacttgcatctcagaacgaatcatatttatgtatcttccgacgatataaaagaaacgggt
tacacgtacatattgccgaagaatgtgctcaagaaattcgttacgatttctgatttacga
gcacagatcgcaggatacttgtacggtatcagtccaccggataatcctcaagtgaaagaa
atcaggtgcatagtgatggctccacagtggggaacgcatcaaaccgttcatttacctaat
acgctgccgaatcatcaatatctgaaggaaatggaaccccttggttggattcacactcaa
cccaatgaattaccgcagttatcaccgcaggatatatctacgcacgcccggataatggcg
gagaacccaatttgggacggagagaagactattgtaattacttgcagtttcacgccggga
tcttgctcccttacagcttacaagttgacacccagcggtttcgaatggggaaaacaaaac
accgacaaaggcaataatcctaaaggttacctgccgagtcattacgagaaagtgcagatg
ctactgtccgatcgtttccttggattcttcatggtgccgagtcaagggtcttggaactac
aattttatgggagtgcggcacgatccaaacatgaagtacgagctccagttggcgaacccg
aaagaattttatcatgagattcatcgacccgctcactttttgaatttctcgagtctggaa
gatggcgaaggggttggcgccgatcgagaagatgtattcgcttaa
DBGET
integrated database retrieval system
