Nomia melanderi (Alkali bee): 116426466
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Entry
116426466 CDS
T07404
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116426466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmea03019
]
116426466
Messenger RNA biogenesis [BR:
nmea03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116426466
U7-dependent histone pre-mRNA processing factors
116426466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
116426466
NCBI-ProteinID:
XP_031831307
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MTSIIKLHAVSGAMDESPPCYILQVDELRILLDCGWDENFDQEFIKELKRHVHQIDAVLL
SYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVD
AAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKK
ERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTA
GRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCSNPQNSIILTSRTS
PGTLARDLVEKGGNRNITLEVKRRIRLEGLELEEHQRKERLKQEQLKQEQMETADVSSES
EDEIEVGGGRGKHDLLVKQESKPGFFKQSKKQHPMFPFVEEKIKIDEYGEIIRPEDYKIA
ETMPEIDDNKENLETKQEDAAHHPEVATDIPTKCIQVTRTMTVNASVTYIDFEGRSDGES
LQKILAQLRPRRVVLVRGAPKDTEILAQQAQGAGARVFIPGRGETLDATTETHIYQVRLT
DALVSGLNFSKGKGDSEVAWIDAMITARDQVCRDAVADTQQDDTIDQNDKILTLEPLPLN
EVPGHQTTFINELKLSDFKQILNKSNIPSEFSGGVLWCCNNSIAVRRHEAGKVILEGCLS
EDYYKVRDLLYEQYAIV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaattataaagcttcatgctgtttctggagctatggatgaatctcctccttgt
tatatattacaagttgatgaattaagaatactacttgattgtggatgggatgaaaatttt
gatcaagaatttataaaggaattaaaacggcatgtacatcaaatagacgcagtattgctg
tcatatccagatccattgcatttgggtgctttaccatatttagttggaaaatgtggttta
aattgtccaatatatgctacaattcctgtatataaaatgggacaaatgtttatgtatgat
atgtatcagtctcgtcataatatggaagattttgatctctttacattggatgatgtagat
gcagcatttgataaaattgttcagttgaaatataatcaaagtatatcaatgaaaggaaaa
ggatatggagttactttgacacctttgccagctggtcacatgattggaggaactatttgg
aaaattgtaaaggttggggaagaagatataatatatgcagtagatttcaatcataaaaag
gagagacacttaaatggttgtgaattagaaagattacaaaggccatctttattgataaca
gatgcttttaatgctacgtatcagcaagctaggcgtagaactagagatgaaaagttgatg
acaaatattttacaaaccttgcgtggtggtggaaatgttttagtcagtgtagatacagct
ggtcgtgtattagaattagcacatatgttggatcagctttggcgtaataaagaatctggt
ttgcttgcatattcactggctcttctgaataatgttagttataatgttgtagaatttgca
aaatcacagattgaatggatgagtgataaattaatgagaagctttgaaggagctagaaat
aatccattccaatttaaacacttgcaactatgtcacagcatggcagaactaaatcaagtt
cctagtccaaaggttgtacttgcaagtactccggatatggaatgtggattctcaagagaa
ttgtttttacagtggtgtagtaatcctcaaaacagtattatcttaactagtagaacttcc
ccaggaacattggcaagagatttagtagagaaaggaggcaatagaaatattacattggaa
gtgaaaagaagaattagactagaaggtcttgaattagaagaacatcaaagaaaagaaaga
ttaaaacaagaacaattaaaacaggaacaaatggaaactgctgatgtaagttctgaatcg
gaagatgaaattgaagttggtggtggaagagggaaacatgatttattagtgaaacaagaa
agcaaacctggcttttttaagcaaagtaagaaacaacatcctatgtttccgtttgtagaa
gaaaaaattaagatagatgaatatggagaaattataagacctgaagactataaaatcgca
gaaactatgccagaaatagatgataataaagaaaatctagaaacaaaacaagaagatgct
gcacatcatccggaggtagctactgacattcccaccaaatgcattcaagttacccgtaca
atgacagttaacgcatctgtcacatacatagactttgaaggcagatctgatggtgaatca
ttgcaaaaaatcctagcacaattgagacctcgaagagttgtattggttagaggggctcca
aaggatacagaaattcttgctcaacaagcacaaggtgcaggtgcacgagtatttatccct
ggtagaggagaaacattagatgctacaacagaaacacatatttatcaggtccgtttgact
gatgctcttgttagtggtttaaacttttctaaaggaaaaggtgattctgaagtagcatgg
attgatgcaatgataactgctcgagatcaagtttgtcgggatgctgttgctgacacacaa
caagatgacacgatagatcaaaatgataaaatacttactttagaacctttaccattaaat
gaggtacctggacatcaaacaacatttataaatgagttaaaattatctgacttcaaacaa
attttaaataagagtaatattccctctgaatttagcggaggagttttatggtgttgtaat
aattccattgctgttagaaggcatgaggctggtaaagtgatattagaaggctgcctatct
gaagattattataaagtacgtgatttattgtatgaacaatatgccattgtataa
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