Nomia melanderi (Alkali bee): 116426508
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Entry
116426508 CDS
T07404
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmea03021
]
116426508
03041 Spliceosome [BR:
nmea03041
]
116426508
Transcription machinery [BR:
nmea03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116426508
Spliceosome [BR:
nmea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116426508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116426508
NCBI-ProteinID:
XP_031831389
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN
AVFPSEVIQPLFDLADPNHPIHKEQAVNANGTLNTSSTNNTSNTGTAVKTPPLAAKNAVK
DQKLFSSTKTIDPVWLAQTKMETANIVNANKLLGQSNSGQMDASFLDQLQHLQQLLLKKQ
EAANEQKTSVKFDKKLLDFDYGEEEDDDVVVANSPVATTASNAGQHNVPTGNSLESLGFL
LTNPEVLRQLQTLQQTMQGNVSSSQHEMEEKMRKLQQMKQQEEEFDKHLAQTVPNLPFAS
ECELKPSDILKPNQQNAYTANVSSGVIQDMSQPPPGYPPALPYVSQPLSNIRQINQQGHQ
NQKSPLLDERQDTQDYSGNGARRDSSSVEIVNCDSTRSQSRSPDRYRHHSRSRSPRHRDR
DRDRDRDRDRDRDRDRDRDRKSRSRSRSRRRRSRSRDRGRDRKRDDSREKMTEEEREKER
ERRKRGLPPIVRDKLSVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFI
CMNRRQDAYRALTKLKNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLIN
VTDQDLELLEEGGMIDEDTLPPNLKGKLKHSGTNADMLQQQLQLQQQALVAAATMPSLAD
GIVNVMQPTSSTQQQQSQQTQQQGQQQQQVIDTSQPPPIRPPTSAALLPPPNTQLQMMPP
AFTMPGVPRMIGPMGLPMAHSLMPNVPIGVPPPNMQSLLGPPGMMQTMLTPQVNSPFGAG
VGVGLLTQIPLPAPAAPSDKPNSTGMPHNVPPIGVPPPTTETGMPNLPMLRQPYGVGPSA
PLQMQLPQQQHSADDMDVEMEDAMPPSSNGAKNKGNLTDQQLSQNEDRPDGDQQSEQHRD
YKERDRERENRERRDRETHLSHRDRDNNDSRMDRGRERGRGRDRGRDRRRDIRDRDRDDR
RERENRENREGNPQNQSLQENDSTPKKDGKPSLADRLRQLADGTLPLEDRGDRIPARTRQ
DRDRSDRTFDDARTARGEPLSSLMDLPKFGLPQERSDFPARPPDFRNPQDPREFQQQRDR
QNFGRGPRGSQMHEEFMDAPRIQAGMFQEEFDNRIHGQQRIEEFGRLGPPREQREEFDRS
EVRGRRPLDDRDRFDFEIRRDGFDPRLQDGFDPRGHLDRGDFEPRRREFFGIEPMFGMPP
IMGPRGPRPGHPDGFGPRPAPLGARGPGPLMFHPRGLGPRPLRPGMRPFGPRGPPFDPRE
PDAFFRPPFDDIRPHVRPPFGPMGPPSILPPESAAPWRNQEHPPGSWPPDAENHSQRDNT
RDKKAGKHPNNQNIERDNRNNRGRKSRWANVSPSGEETEDSKEQEPVSVAADEKEELVKE
EEVVVKAEEVKDEVTMEVIPSEKEEDSEQTAVETNQEQGIETKKEEEDRRDS
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggttaaggcatttaacgcggagctttcagctctttatgatgtcaaaccgccg
atttctaaggccaagatgaactctttaaccaggggcgcaattaaggcaatcaaattctat
aagcatgttgtgcaaagtgttgaaaaattcattcaaaagtgtaagccagagtacaaagtg
cccggattatacgttatagattcaattgtgcgtcagtcgagacatcagtttggggtagag
aaagatgtatttgctcctcgctttgctaagaatatgcaaaccaccttcttgaacctttta
aaatgtcctcaagaagataaaagcaaagtgattagagttttaaatctttggcagaaaaat
gcagtttttccatccgaggttatacaacctttattcgatcttgcggatccaaatcatcca
atccataaagagcaagcagttaatgcaaatggtacattgaacacttcttcgacgaataac
acaagcaatactggtactgctgttaaaacaccccctttagctgcaaagaatgcagtaaag
gatcagaagttattttcttctacaaagactattgatcctgtttggcttgcacaaacaaaa
atggagacagcaaatatagttaatgccaataaactattgggtcagtctaattcaggtcaa
atggatgcttcttttcttgatcagctgcaacatttgcaacagttgttgctcaaaaaacaa
gaagcagcaaatgaacaaaaaacttctgtgaaatttgataagaagctcctggattttgat
tacggtgaagaagaagatgatgacgttgtagttgcgaattcaccagtggcaacaacagcg
tcaaatgctggccaacataacgttcctacaggaaatagtttggaaagtcttggattcctc
ctaacaaatccagaggttttgagacagcttcaaacattgcaacagacaatgcaagggaat
gtatcatcatcacaacatgagatggaagaaaagatgaggaaattacaacagatgaagcag
caggaggaggagttcgataaacatttggctcaaactgttcctaatctaccatttgcatcg
gaatgtgaattaaaaccgtcggacatcttgaaaccaaatcaacaaaacgcatatacagca
aatgtaagtagcggagttatacaagacatgagtcaaccacctcctggttatcctccggct
ctaccctatgtctcgcaacctttatcaaacatcaggcagattaaccaacagggtcatcaa
aatcaaaaaagtccgcttcttgacgagcgacaagatacacaagattattctggaaatggt
gcaagacgagatagtagcagcgtagaaattgtaaattgtgatagtacacgatcacagagt
agatcacctgaccgatataggcatcatagtcgatctagatcaccacggcatagggataga
gatagagatagggatagggatagggatagggatagggatagagatcgagacagagataga
aaatctcgatcgagaagtagatccagaagaaggaggtctcgttcgagagatagaggacgg
gatagaaaacgtgatgatagtcgagaaaaaatgaccgaggaagaacgagaaaaagaaaga
gaaagacgcaaacgaggcctgccaccaattgtgagagataaactaagcgtttgcagtaca
actttgtgggtaggacatctgtctaaattagtacaccaagaagaactttcagacactttt
ggagaatttggtgatattgtcagtatagatctaatttcacctaggggttgcgcttttata
tgtatgaatagaagacaagatgcctacagagctcttaccaagcttaaaaatcacaaaatg
cagggaaaagcgattactttagcctgggcacctgggaaaggtgttaaaggaaaagaatgg
aaagattattgggaagtcgaattgggagttagttatatcccttggaataagttaattaat
gtcactgaccaggatttagaattactcgaagaaggtggaatgattgatgaagatactttg
ccgcctaacttgaaaggtaaactaaagcattccggaacaaatgcagacatgcttcagcaa
cagttgcaattacagcagcaagctttggttgcagccgccacaatgccaagtttagctgat
ggcattgtgaatgtgatgcaacctacatctagcacacaacagcaacaatctcaacagacc
caacagcagggtcaacaacagcagcaagtgattgatacgagtcaaccaccgccgattaga
ccacccacatcagctgcacttctgcctccaccgaatacgcagttacagatgatgccacct
gctttcacaatgccaggagttcctcgtatgattggaccaatgggattaccaatggcgcat
agtttgatgcctaatgttccaataggtgtgccgcctccaaatatgcaaagtctgttaggg
ccaccaggaatgatgcaaactatgctcacaccccaggttaattctccgttcggagctggc
gtgggtgttggattattgacgcaaattcctttgcccgcacctgccgcaccctctgataaa
cccaattctactggtatgccacataatgttcctccaattggagtcccgccgccaacgaca
gaaacgggaatgccaaatctgccaatgttacgccaaccttacggtgtaggaccttctgct
cctttacaaatgcaactacctcagcaacaacattctgcggatgatatggatgtagaaatg
gaagatgcgatgcctccaagttcaaacggagctaagaataagggaaatttaactgatcaa
caattgtcacaaaacgaggatagaccagacggtgatcaacaatcggagcaacatcgggat
tacaaagaaagggacagggaacgtgaaaacagagagagaagagatagagaaacacatttg
tctcatagagatagggacaacaatgattctagaatggatcgtggaagggaacggggtaga
ggaagagatcggggacgtgatcgtagaagagatatcagagatagggatagggatgacaga
agggagagggaaaacagagaaaatcgcgaaggaaatccacaaaatcaaagccttcaggaa
aatgattctactccgaaaaaagatggtaaaccgagtttagctgatcgtcttcgtcagttg
gctgacggtacacttccattagaagatcggggtgaccgaataccagctcgtactcgccag
gatcgagacagatctgataggacttttgatgacgctcgaactgcacgcggcgaacctctt
tcgtccttaatggatttaccgaaatttggcttgcctcaagaaagaagtgattttcctgct
cgacctccagatttccgaaatcctcaggatccaagagagtttcagcaacaaagagacaga
caaaattttggaagggggcctagaggatctcaaatgcatgaagagtttatggacgcccca
agaatacaggctggtatgttccaagaagaattcgataataggatacacggacagcaaaga
atagaagaattcggaagacttggaccccctagagaacagagggaggaattcgataggtct
gaagtacgaggaagaagaccgctcgacgatcgggatcggtttgactttgaaattagacga
gatggatttgatccacggcttcaggacggttttgatccaagaggacatctagatcgcggc
gattttgaaccgaggcgacgagaattctttggtattgaacccatgtttggaatgccgcct
attatgggacctagaggtcctagacctggacatccagatgggtttggacctcgtccagct
ccacttggtgcccgtggccctggacctttaatgttccatccacgggggttagggcctcgt
cctcttcgccctggcatgaggcctttcggtcctcgtgggccaccatttgatcctcgtgag
ccggatgcctttttcagacctcctttcgatgacattcgccctcacgtaaggcctccattc
ggccctatgggtcctccttcgattcttcctccagaatctgctgccccatggaggaatcag
gaacatcctcctggttcgtggccacctgacgctgaaaatcactcgcaaagagacaatacc
agagacaagaaagctggtaaacatccaaacaaccaaaacatagaaagggacaatcgaaac
aataggggacgcaaatctaggtgggctaacgtgagtccatctggggaagaaacggaggat
tccaaggagcaagaaccagtttccgttgcagctgacgaaaaagaagaacttgttaaagaa
gaggaggttgttgtaaaagccgaagaagtaaaagatgaagtaacaatggaagtgattccc
agtgaaaaggaggaggattcggaacagacagcagttgagacaaaccaagaacaaggcatt
gaaacaaagaaggaggaagaggaccgcagggattcttag
DBGET
integrated database retrieval system
