Nomia melanderi (Alkali bee): 116426923
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Entry
116426923 CDS
T07404
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116426923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116426923
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116426923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
PA28_N
AAA_27
CRISPR_Cas2
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
116426923
NCBI-ProteinID:
XP_031832452
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MAVQPNQQFQMDPATQQSFIRFFKNLPEKLNTTIRFFNRSDYYTLHGSDALFAAQEIFKT
TSVCKMIGSDPYKTEGVILNKNHFEAFIRDLLLVKQYRVEIYVNQGSAKNQNWVLEHKGS
PGNLIQFEDVLFGNNDVAVTVRVIAVKVGMDGKSRMIGLSCVDTTATLFSVCEFQENESF
SNLESLVVTLAPKECLLIQGEGSYEFQTLKQVMERNNVMVTVRKKNEFSSESIVQDLNTL
IKFKHGQQQNVQSLPEINLNLAMSATSALIKYLDLTSDEGNLNQFSIDQIEHSRYLKLDG
AAVKALNIEPRADTASALNGNAPTSILTLLDKCRTPQGHRLLAQWIRQPLKDLSLIKERH
DIVEALVNDNELRSGLSDDHLRRIPDLQILSKKLSRKKATLQDCYKIYNSVSDLPRLVEK
LSSVNTVALKTMFTDSLTELINDMDKYQQMAEQTIDLEAAEKGDFLVRPEFDDELKELKS
TMDEIEEKIKAQLGKVAADLSIEAGKTVKLESNQQLGYYFRVTLKEEKVLRNKKQYTILD
SNKGGVRFRSNKLIDLNDDYIACRDKYTAEQKKVVAEIMEIAAGYSGPIKMIGNVLASLD
VLTAFASAAVSANRPYVRPDMLPSETGELNLVQVRHPCLEVQEGVDYIANDVNFKRGEYH
FCIITGPNMGGKSTYIRSVGVAALMAHIGSFVPCDEAKISLLDCILARVGADDSQLKGLS
TFMMEMIETAAILKTATSNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKSIKCYCLFATH
FHEITKLEDEITAVKNQHVTALVDNNKLTLLYKIKPGVCDQSFGIHVAKMANFPPEIIEF
AKQKQTELEDYQGSVFEGSDNPQEKQKIIKEAEELIKGFINKCRTLDKTLSDEELKNKIS
TYKEEVLSHKNPYIDALLVAS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacaaccaaatcagcaatttcaaatggatccagctactcaacaaagttttatt
agatttttcaaaaatctacctgagaaacttaataccactatacgatttttcaatagatcg
gattattatacattacacggtagcgatgctctctttgctgctcaagaaatttttaaaact
acatcagtttgtaaaatgataggctcagatccatacaaaaccgaaggagttattttaaat
aaaaatcactttgaagctttcatccgtgatttgttattagttaaacaatacagagtagaa
atctatgtcaatcaaggatcagcaaaaaatcagaactgggtattagaacataaaggctct
cctggtaatttaattcagtttgaggatgtactatttggtaacaacgatgtagctgtaaca
gtacgtgtcatagcagtgaaagtaggaatggatgggaaatccagaatgattggtttaagc
tgtgtagatactactgcaactttattttctgtttgtgaatttcaagaaaacgaatcattt
tctaatctggaatctctagttgttacacttgcccctaaagaatgtttattaattcaagga
gaaggtagttatgaatttcaaactttgaaacaggtgatggaacgaaacaatgtaatggtt
actgtaagaaaaaaaaatgagttttccagtgaatcaatcgtacaagatttaaatacttta
atcaaattcaaacacggtcaacagcaaaatgtgcagtccttgcctgaaataaatttaaat
cttgccatgtcagctacttctgctcttattaagtatttggatttaacatcagacgaaggg
aacttgaatcaatttagtatagatcaaatagaacactcgcggtatttaaaattagatgga
gctgctgtaaaagcacttaacattgaaccacgtgccgatactgcttctgcattgaatgga
aatgcacctacgagtattttaacacttttagataaatgtagaacaccacaaggtcatagg
cttctggcacaatggatcagacagcctctgaaagatttatctctcattaaagagagacat
gacatagttgaagcattggtaaatgacaacgaattgcgatctggacttagtgatgatcat
ttaagacgtataccagatttacagatactttcaaaaaaattatccagaaagaaagcaact
ttacaagattgttacaaaatttataatagtgtatcagatctaccaagattagtagaaaaa
ttatctagtgtaaatacagtagctttaaaaactatgtttaccgattcattaacagaactt
attaatgatatggataagtatcaacagatggctgaacagacaattgatttggaagctgct
gagaaaggagactttttagtgcgaccagagtttgatgatgaattaaaagaattaaaaagt
actatggatgaaatagaagaaaaaattaaagcacaattaggtaaagttgctgcagatctc
tcaattgaagctgggaaaacggtaaaattggaatccaatcagcaacttggctactatttt
cgtgtaacattgaaagaagaaaaggtattaaggaataaaaaacagtacactattttggat
tcaaataaaggtggtgtacgatttcgaagcaataaactcattgatttaaacgacgattac
attgcatgcagagacaagtatacggcagaacagaaaaaagttgtagcagaaataatggag
attgcagctggctacagtggacctataaaaatgattggaaatgtgttggcttccctcgat
gtacttactgcttttgcttctgctgctgtaagtgcaaatagaccttatgtccgccccgat
atgctacctagtgaaacgggtgaattaaatcttgtccaagttcgacatccgtgcttagaa
gttcaagaaggggtagattatatagctaatgatgttaattttaaaagaggagaataccat
ttctgtataataactggtcctaatatgggaggtaaaagcacatacataagatctgttggt
gtcgccgcgctaatggcacatattggaagttttgttccctgtgacgaagcaaaaatatca
ttactggattgtatattagcccgtgtaggtgctgatgattcacaattaaaaggactttcc
acattcatgatggaaatgatcgaaactgctgctatactaaagacagctacttctaactct
cttgtattaattgatgagctaggaagaggtacatcaacttacgaaggttgtggtatagcg
tggtcaattgctgagtacttagcaaaaagtataaaatgctactgtctttttgcaacacat
ttccatgaaattactaaattggaagatgaaataaccgctgttaagaaccaacatgttact
gctcttgttgacaataataagctaactttattatacaaaataaaaccaggcgtctgcgat
caaagcttcggaatacatgttgcaaaaatggctaattttccaccagaaatcattgagttc
gctaagcagaaacaaactgaacttgaagattaccagggttcagtttttgaaggctctgat
aatccacaagagaaacaaaaaattattaaggaagctgaagaacttattaaaggatttatt
aataagtgcagaacattagataaaactttatctgatgaagagttgaaaaacaaaatctca
acatacaaagaagaagttctttctcacaaaaatccttatatagacgcactacttgttgct
tcatga
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