Nomia melanderi (Alkali bee): 116427181
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Entry
116427181 CDS
T07404
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03440
Homologous recombination
nmea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116427181
03460 Fanconi anemia pathway
116427181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmea03032
]
116427181
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116427181
Enzymes [BR:
nmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116427181
DNA replication proteins [BR:
nmea03032
]
Eukaryotic type
DNA Topoisomerases
116427181
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116427181
FA (Fanconi anemia) pathway
116427181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-LITAF-like
Toprim_4
Motif
Other DBs
NCBI-GeneID:
116427181
NCBI-ProteinID:
XP_031833067
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MSNFSIKLLNIVTFNFNKPAQYFLFVRHNSSNNVMKVLNVAEKNDAAKNIAGYLSRGNSR
RREGLSPYNKIYEFTSNLWNQNCDMIMTSVSGHLLNNEFVGVYRKWQSCHPLSLFDAPVA
KQCSDETYIKIKRTLEKEIMKCTALIIWTDCDREGENIGFEIIQVCQAAKPNIRVYRAKF
SEITQTSVNRALQNLCEPDKAVSDAVDVRSELDLRIGAAFTRFQTMRLQKIFPRTLGDML
ISYGSCQFPTLGFVVERFLAIEKFKPEPYWKIKVTDIRDQISVEFKWARGRLFEKLPCEV
LLDTCLEQPNATVQKITSKPKSKWRPLPLDTVELEKQGSRKLHLSAKQTMKIAEKLYTQG
LISYPRTETNIFPKELNLVPLVNQQVNNSAWGGFAQRLLEGRLNPRQGKKSDQAHPPIHP
IKYTDSLQGNEEKVYEFVVRHFLACVSKDALGQETTVEIDIAGEKFIANGLQIIERNYLD
VYIYEKWSDKEIHTYQEGQIFQPTSIDMVQEQTTPPRLLTEADLISLMDKFGIGTDATHA
EHIDTIKSRQYIGITDGKYLMPGKLGIGLVMGYDNMGFHMSKPDLRADLEKDLKLICERQ
KDPKGVLQTQINKYRDVFKTSLERANLIDNALSNYLDEQPGQAEEMQINNLPEEIAIFKC
PKCNLNMTLKTRKQGSGKYIGCMGFPTCNNAIWFPDTVESIEVLDEVCSECAGNMRKLKF
KLTQNAFPFYGTSYTTCIGGCDPSFNELLSIKTENLKCVRPTNDSGYNSIFNGSRSTVVS
NSASVRNSGSQQSRVRNATNLSGNNTSIGLVRTQNSNQRDANRSRKNNRNVKKQNESKDS
DTWIDTRNFRSSSNESRQPRVEQTNAWGEIDSNAVIVCRCNENAIQLTVRKEGPNQGRAF
YKCAKLQGTDCNFFLWASDNVQQTENSADRNRNRNYMPSANTSPRPSTSNTWRQGDMSEP
SNVKCHCNQLAKERTVQKEGPNKGRPFYSCPKPMNESCKFFQWADENVENHNESFGNRSN
NRSRNKGSNNVQRKPRATGGKRKCGLCGVEGHTRKTCPENAMD
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttttccataaagttattgaatattgtaacattcaatttcaataaaccagcg
cagtatttcttattcgtaagacacaatagctctaataacgtcatgaaagtccttaacgtc
gcagagaaaaatgatgccgcgaaaaatatcgcaggttatttgtcacgtggaaactccagg
cggagagaaggtctgtcaccatacaataaaatttacgaatttacttccaacttatggaat
caaaactgtgatatgattatgacatctgtgtctggtcatttgttgaataatgaatttgtt
ggagtatatcgtaaatggcaaagttgtcatccactaagtttatttgatgcacctgtagca
aaacaatgttcggacgagacttatattaaaattaaaagaactttagaaaaagaaataatg
aaatgcactgcattaattatttggacagattgcgatcgtgaaggagaaaatattgggttt
gaaattattcaagtctgccaagcagctaaacccaatatacgtgtatatagagcaaagttt
tctgaaatcacgcagacatctgtaaatagagcactccaaaatttatgtgaaccagacaaa
gcagtcagtgatgctgtcgatgtacggagtgaattggatctaagaataggtgctgcattt
actagatttcaaacaatgagacttcagaaaatatttcctaggactcttggtgatatgctt
atcagttatggtagctgtcagtttccaacattaggatttgtagttgagagatttttagcc
attgaaaaatttaagccagaaccctattggaaaataaaagttacggatattcgtgatcaa
atttcagtagaatttaaatgggcaaggggcaggttatttgaaaagttgccttgtgaagtt
ttactggacacatgcttagaacaacctaatgccactgtacaaaaaattacaagtaaaccc
aagagtaagtggagaccactaccattggatacagttgaactggaaaaacaaggatctcgt
aaactccatttgagtgccaagcaaacaatgaaaatcgcagaaaaattatatactcaaggt
cttattagctatccacgtacagagacaaatatatttccaaaagagttaaatcttgttcct
ttagtaaatcagcaagtaaataattcagcttggggtggctttgcgcagcgattactagaa
ggaagattaaatcctagacaaggaaaaaagagtgatcaagcgcatcctcctatacatccg
ataaaatataccgacagtttacaaggcaatgaggagaaagtttatgaattcgtcgttcga
cactttttggcttgtgtatcgaaggatgcattaggacaagaaacaacagtggagattgat
atagctggagagaagtttattgctaatggcttgcaaattattgaacgaaactatttagat
gtgtatatatatgaaaagtggagcgacaaagaaatccatacgtaccaagaaggacagatc
tttcaacctaccagtatagacatggtccaggaacaaacgactccaccgcgattattaact
gaagccgatttgattagtttgatggacaaattcggtattggtactgatgctacgcatgcc
gaacatatagatacaataaagtcacgtcaatacataggtataacggatgggaaatattta
atgcctggaaaacttgggattggattagtaatgggatatgacaacatgggatttcatatg
tcgaaaccagatttaagagccgatctagaaaaagatcttaaactaatttgtgaacgacaa
aaagatccaaagggcgtattacaaactcagataaataaatatcgtgatgtctttaaaaca
tcattggaacgtgctaatttaattgacaatgctttgtctaattatctcgacgaacaacca
ggccaagccgaagaaatgcaaattaataatttacccgaagaaattgcaattttcaagtgt
cctaaatgcaatttaaatatgacgcttaaaacgagaaaacaaggctcgggaaaatatatt
ggttgtatgggatttccaacgtgtaataacgcaatatggttccccgacactgtagaatcc
attgaagtattagatgaagtttgctcggaatgtgcaggaaatatgcgtaaactgaagttc
aagttaactcagaatgcttttccattttatggtaccagttacacaacttgcatcggcggg
tgtgatccttcatttaatgaattactaagtattaaaactgaaaatcttaaatgtgttaga
ccaacaaatgatagtggttataacagtatattcaacggatcacgatcgactgttgtttca
aattcagcttcagtaagaaacagtggatctcaacaatctcgtgttagaaacgcgacaaat
ttatcaggaaataacacgtctatagggcttgttagaactcagaacagtaatcaacgcgat
gcaaatagatcaagaaagaataacagaaatgttaaaaaacagaatgaatcgaaagatagt
gatacgtggatcgacacaagaaatttcagatcctccagcaacgagtccagacaaccaaga
gtagaacaaactaacgcatggggtgagatcgatagcaatgctgttattgtatgtagatgt
aatgaaaatgcgattcagttaaccgtgagaaaagaagggccgaatcaaggaagagcattt
tataaatgtgccaaacttcaaggtactgattgtaatttctttctgtgggcatcggacaat
gtacaacaaacggaaaatagtgcggatagaaatagaaatagaaattatatgccaagtgca
aatactagccctaggccaagcacctctaatacatggcgacaaggggatatgtctgaacca
tctaatgttaaatgtcattgcaatcaattggcgaaagagcgaaccgttcagaaagaaggt
cctaataaaggacggccattttattcgtgtccaaagccaatgaacgaatcttgcaaattc
tttcaatgggcagatgaaaatgttgaaaatcataatgaatcttttgggaacagaagtaat
aatcgatctagaaacaaaggatctaataatgtacaaagaaaacctcgagctaccggtggt
aaaagaaaatgcggactttgtggagtggaaggacatacaagaaaaacttgtcctgaaaat
gcaatggattaa
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integrated database retrieval system
