KEGG   Nomia melanderi (Alkali bee): 116427214
Entry
116427214         CDS       T07404                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
nmea  Nomia melanderi (Alkali bee)
Pathway
nmea03030  DNA replication
nmea03410  Base excision repair
nmea03420  Nucleotide excision repair
nmea03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nmea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116427214
   03410 Base excision repair
    116427214
   03420 Nucleotide excision repair
    116427214
   03430 Mismatch repair
    116427214
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmea03032]
    116427214
   03036 Chromosome and associated proteins [BR:nmea03036]
    116427214
   03400 DNA repair and recombination proteins [BR:nmea03400]
    116427214
DNA replication proteins [BR:nmea03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116427214
  DNA Replication Termination Factors
   ELG1-RFC complex
    116427214
Chromosome and associated proteins [BR:nmea03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116427214
DNA repair and recombination proteins [BR:nmea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116427214
  Check point factors
   HRAD17(Rad24)-RFC complex
    116427214
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA Rep_fac_C AAA_11 AAA_16 AAA_30 AAA_22 ATPase_2
Other DBs
NCBI-GeneID: 116427214
NCBI-ProteinID: XP_031833154
LinkDB
Position
Unknown
AA seq 355 aa
MSLWVDKYRPTTLGKLDYHKEQAEYLKNMVQKGDFPHLLVYGPPGAGKKTRILCVLKELY
GSGAERLRMETMNFETPSKKKLEITTISSNYHIEVNPSDVGIYDRVVVMDLVKTTAQTHQ
IDSSGQRDFKVVLLTNVDQLTKDAQHALRRTMEKYVATCRLILCANSTSKVLPAIKSRCL
GIRVPAPSISDIKSILHLVCKREGLTLPDELAVRLADASGRNLRRAILMLEACKVEQYPF
TADQIITEPDWQVYIRNTANMMVSEQSPKKLLEIRNRLYELLTHAIPTDLIFKGLLQECI
KNCDLQLKIEIATVAAEYEHKMHRGSKAIFHLEAFVARFMAIYKKFIDSSLEGFV
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagtctttgggtagataaatatcggccaacaacgctgggaaaattagattatcacaag
gagcaagcagaatatttaaaaaatatggtacagaaaggagattttccacatttgttagta
tacggcccacccggtgcaggaaaaaagactcgtatattgtgtgttttaaaagaattatat
ggaagtggagctgaaagattgaggatggagactatgaattttgaaacaccatccaaaaag
aaattagaaataacaacaataagcagcaattatcatatagaagtgaatcctagtgatgta
ggtatatatgatcgagtagttgtcatggacttagtaaaaacaactgctcagacccatcaa
atagattcaagcggacaaagagactttaaagtggtacttttgacaaatgtagatcaactc
acaaaggatgcgcaacatgcacttagaagaacaatggaaaaatatgttgctacatgtaga
ttgatactttgtgcgaattcaacatctaaagttttaccagctataaaatctagatgttta
ggaattagagtaccagctccatcgatatcagacataaaaagtattttgcatttagtttgt
aaacgtgaaggcttaactctgccagatgaactagctgttagattggctgatgctagtggc
aggaatctaagacgagctatactgatgcttgaagcttgtaaagttgaacaatacccattt
actgcagaccaaataattacagaaccagattggcaagtatacattagaaatactgctaac
atgatggtcagtgaacaaagtcccaaaaaactattggaaatacgaaatagactgtatgag
ctattgacgcatgctataccaacggacttaatatttaaggggcttctgcaagaatgcatt
aaaaattgtgatcttcaattaaaaattgagattgcaacggttgcagcagaatatgaacat
aaaatgcataggggatcaaaagctatttttcatttagaggcattcgttgctcgatttatg
gcaatttacaaaaaattcattgattcatctctcgagggttttgtgtga

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