Nomia melanderi (Alkali bee): 116427366
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Entry
116427366 CDS
T07404
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03030
DNA replication
nmea03420
Nucleotide excision repair
nmea03430
Mismatch repair
nmea03440
Homologous recombination
nmea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116427366
03420 Nucleotide excision repair
116427366
03430 Mismatch repair
116427366
03440 Homologous recombination
116427366
03460 Fanconi anemia pathway
116427366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmea03000
]
116427366
03032 DNA replication proteins [BR:
nmea03032
]
116427366
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116427366
Transcription factors [BR:
nmea03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116427366
DNA replication proteins [BR:
nmea03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
116427366
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
116427366
MMR (mismatch excision repair)
116427366
DSBR (double strand breaks repair)
HR (homologous recombination)
116427366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
POT1
IBR
Motif
Other DBs
NCBI-GeneID:
116427366
NCBI-ProteinID:
XP_031833471
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MHSLTEGALDKIMNGIDVDKPVLQILGHKKLASTNSGERYRLLVSDGKSINSFSMLATQL
NSMITDNILTEFSICQINRYAISMVNNAGKQKRVMVILNIDVKVPGNEVGHRIGNPINAD
FEGDSKPAQSAQPGRSVQSPPKQKNNYAQKSSTNQASTNDISTVPIVALSPYQNRWVIKA
RVVSKSGIRTWSNSRGEGKLFSMDIVDESGEIRCTAFRDQCDKFYDMLEVGKVYYISRAT
LKTANKQFNNLKNDYEMTLIGDSEIIPCYDAGNEIPSLRFDFMPISQVENKEKNDIMDIL
GVVKSCSDLQVLTSRTTGREMKKKDVNLVDESNTMVCLTLWGSQAEDFDGSMNPVLAIKG
ARVGEFNGGKNLSTISSTVLQVDPDIPEAHRLRGWFNTVGRNEEIRAISRGLGDAGGGVS
GPFLTFKEAKDKELGYNGPDVYTVKATVNMIRVENSLYKSCPTESCKKKLIDQANDMYRC
EKCDKEFPNYRYRLLASLSLADWTGHQWATAFSEEAEKMIGITAQELGELKENDNEAFLE
KFANATFKSFIFKLRVKMEEFNDEKRLKATCLGVSPVDYKVYNDHLLTQIKELAGIGKA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgcttaccgaaggagcattagataaaataatgaatggcattgatgttgataag
cctgtactccaaattttgggacataaaaagcttgcaagtacaaatagtggggaacgctat
agactacttgtatccgatggaaaaagcataaactcattttcaatgttagctactcagtta
aattcaatgatcacagataatatactaactgagttttctatttgtcagataaatagatat
gcaataagtatggtgaacaatgctgggaaacaaaaacgtgtgatggtgatattaaacatc
gatgtaaaggttcctggtaatgaagttggccatagaattggtaatccaattaatgctgac
tttgaaggtgattctaagccagcacaatcagcacaaccaggacgatcagtacagtctcca
cccaagcaaaaaaataattatgcacaaaagagtagcacaaaccaagcttctacgaatgat
atatcaacagttccaattgttgcactgagtccttatcagaatagatgggtaataaaagca
cgagttgttagtaaatctggtattagaacatggagcaactcacgtggtgaaggaaagtta
ttttccatggatatagttgatgagagtggggaaatcaggtgtacagcattcagagatcag
tgcgataaattctatgatatgcttgaggttggaaaagtatattatatttctagagccact
ttaaaaacagcgaataaacagtttaacaatcttaaaaatgattatgaaatgactctaatc
ggagactcagaaatcattccatgttatgatgctggaaatgaaattccttcccttcggttt
gactttatgccaataagtcaagtcgaaaataaagaaaaaaatgatatcatggatattttg
ggtgttgttaagtcttgtagtgatcttcaagtattaacttcacgaaccacgggtagagaa
atgaaaaagaaagatgttaatcttgtagatgaaagcaatacgatggtatgtcttacattg
tggggttcacaagctgaagattttgatggatccatgaatccggttctagcaataaaagga
gctcgagttggtgaatttaatggagggaaaaatctatctactattagttccacagttctt
caagttgatccagatatcccagaggcgcacagattacgtggttggttcaatacagtcggc
cgcaatgaagaaatcagagcaatttctagaggacttggagatgctgggggtggtgtaagt
ggaccgttcctcacattcaaggaagctaaagacaaagagttaggttacaatggtcctgat
gtatacacagtcaaagcaactgtgaatatgattcgcgttgaaaattctctttacaaatcc
tgccctactgagagttgtaaaaagaagttaattgatcaagctaacgatatgtacagatgc
gagaaatgtgataaagaattccccaattacagatatcgtttattagctagcttaagttta
gcagactggacaggtcatcaatgggccacagcattcagtgaggaggcagaaaaaatgatt
ggtattacagctcaagaacttggagaattaaaagaaaatgataatgaagcatttctcgaa
aaattcgctaatgcaacgtttaagagtttcatatttaagttacgagttaaaatggaagaa
ttcaacgatgaaaagaggttgaaagcaacttgcctcggtgtatccccggtggattacaaa
gtctataatgatcacttattaactcaaatcaaggaactagctggtatcgggaaggcttaa
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